Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 AC018638.5-201ENST00000450885 754 ntBASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 AC068867.1-201ENST00000559855 150 ntBASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 RN7SL357P-201ENST00000581065 298 ntBASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 SIGLEC22P-201ENST00000599104 714 ntBASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 AC011247.3-201ENST00000603297 438 ntBASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 AC073592.2-201ENST00000623062 780 ntBASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HCFC2Q9Y5Z7 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 RPL35P9-201ENST00000446059 350 ntBASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 RN7SL665P-201ENST00000578793 300 ntBASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 AL451007.2-201ENST00000632004 563 ntBASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 AC015688.4-201ENST00000580780 1647 ntBASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HCFC2Q9Y5Z7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC2Q9Y5Z7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC2Q9Y5Z7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.16■□□□□ 0.02
HCFC2Q9Y5Z7 CICP6-201ENST00000457191 2729 ntBASIC15.16■□□□□ 0.02
HCFC2Q9Y5Z7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC2Q9Y5Z7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.16■□□□□ 0.02
HCFC2Q9Y5Z7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC2Q9Y5Z7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.16■□□□□ 0.02
HCFC2Q9Y5Z7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC2Q9Y5Z7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC2Q9Y5Z7 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC2Q9Y5Z7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC2Q9Y5Z7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
HCFC2Q9Y5Z7 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC2Q9Y5Z7 NHP2-202ENST00000314397 599 ntTSL 2 BASIC15.16■□□□□ 0.02
HCFC2Q9Y5Z7 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HCFC2Q9Y5Z7 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms