Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 AC010487.2-201ENST00000594546 486 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AC138696.2-201ENST00000607376 223 ntBASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AC022919.1-201ENST00000624979 626 ntBASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AC023908.3-201ENST00000564211 3047 ntBASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB13Q9Y5F0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 OR4B1-201ENST00000309562 930 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 ARSEP1-201ENST00000420443 635 ntBASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 AC034187.1-201ENST00000437047 561 ntTSL 4 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 AC109466.1-203ENST00000524297 1083 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 KRT90P-201ENST00000549264 1064 ntBASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 AL109741.3-201ENST00000561748 592 ntBASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 ECM1P1-201ENST00000604092 1279 ntBASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 AC013470.4-201ENST00000619978 986 ntBASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 AC006453.4-201ENST00000636949 1252 ntBASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB13Q9Y5F0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 AL009178.2-201ENST00000597278 2719 ntBASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 AC006001.1-201ENST00000325130 474 ntBASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 RN7SKP230-201ENST00000365642 335 ntBASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 LHFPL3-AS1-202ENST00000416376 866 ntTSL 3 BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 RN7SKP157-201ENST00000516174 282 ntBASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 AP000812.2-201ENST00000538934 718 ntBASIC16.47■□□□□ 0.23
PCDHB13Q9Y5F0 ZNF506-204ENST00000545006 1007 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms