Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 RPSAP52-203ENST00000622976 1023 ntBASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
VPS9D1Q9Y2B5 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 AC092053.3-201ENST00000641308 4975 ntBASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
VPS9D1Q9Y2B5 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 AL035633.1-201ENST00000406139 838 ntBASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 AL512384.1-201ENST00000406683 331 ntBASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 CD8B2-202ENST00000417670 633 ntBASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 OR2X1P-201ENST00000421144 687 ntBASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 RNA5SP486-201ENST00000515961 83 ntBASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 AC233724.13-201ENST00000598383 410 ntBASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 GRK6P1-201ENST00000400595 1711 ntBASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 MYADML-201ENST00000474610 2147 ntBASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
VPS9D1Q9Y2B5 AC011840.2-201ENST00000563063 1520 ntBASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.76□□□□□ -0.05
VPS9D1Q9Y2B5 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms