Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 AC005252.3-201ENST00000623855 2258 ntBASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.27□□□□□ -0.29
PARPBPQ9NWS1 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 AC018442.1-201ENST00000421439 2061 ntBASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 AC106820.3-201ENST00000561653 397 ntBASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.26□□□□□ -0.29
PARPBPQ9NWS1 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 AC015656.1-201ENST00000624209 3578 ntBASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 AL031595.1-201ENST00000623969 4709 ntBASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PARPBPQ9NWS1 HLA-V-201ENST00000429037 534 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms