Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 RN7SL351P-201ENST00000469306 248 ntBASIC13.29□□□□□ -0.28
CHD8Q9HCK8 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 AACSP1-202ENST00000521412 1095 ntBASIC13.29□□□□□ -0.28
CHD8Q9HCK8 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 AP000845.1-201ENST00000581677 2131 ntBASIC13.29□□□□□ -0.28
CHD8Q9HCK8 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 SSR4P1-203ENST00000599569 2260 ntBASIC13.29□□□□□ -0.28
CHD8Q9HCK8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHD8Q9HCK8 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 AL031590.1-202ENST00000641466 1737 ntBASIC13.28□□□□□ -0.28
CHD8Q9HCK8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 RN7SL684P-201ENST00000465665 294 ntBASIC13.28□□□□□ -0.28
CHD8Q9HCK8 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 CETN3-205ENST00000522842 664 ntTSL 2 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 AC127002.1-201ENST00000619123 455 ntBASIC13.28□□□□□ -0.28
CHD8Q9HCK8 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHD8Q9HCK8 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 ST13P19-201ENST00000442505 1124 ntBASIC13.27□□□□□ -0.28
CHD8Q9HCK8 RNA5SP288-201ENST00000516075 93 ntBASIC13.27□□□□□ -0.28
CHD8Q9HCK8 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHD8Q9HCK8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms