Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ELL3Q9HB65 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.96□□□□□ -0.33
ELL3Q9HB65 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ELL3Q9HB65 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ELL3Q9HB65 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ELL3Q9HB65 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
ELL3Q9HB65 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ELL3Q9HB65 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ELL3Q9HB65 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
ELL3Q9HB65 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
ELL3Q9HB65 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.96□□□□□ -0.34
ELL3Q9HB65 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.96□□□□□ -0.34
ELL3Q9HB65 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ELL3Q9HB65 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ELL3Q9HB65 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.96□□□□□ -0.34
ELL3Q9HB65 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.96□□□□□ -0.34
ELL3Q9HB65 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
ELL3Q9HB65 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ELL3Q9HB65 AC006504.5-208ENST00000588784 2401 ntBASIC12.96□□□□□ -0.34
ELL3Q9HB65 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
ELL3Q9HB65 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
ELL3Q9HB65 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 AC092364.2-202ENST00000597012 1073 ntBASIC12.95□□□□□ -0.34
ELL3Q9HB65 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 AC007541.1-201ENST00000570282 1469 ntBASIC12.95□□□□□ -0.34
ELL3Q9HB65 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 AL158070.2-201ENST00000623713 1621 ntBASIC12.95□□□□□ -0.34
ELL3Q9HB65 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ELL3Q9HB65 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
ELL3Q9HB65 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ELL3Q9HB65 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ELL3Q9HB65 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.94□□□□□ -0.34
ELL3Q9HB65 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ELL3Q9HB65 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ELL3Q9HB65 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ELL3Q9HB65 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.94□□□□□ -0.34
ELL3Q9HB65 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.94□□□□□ -0.34
ELL3Q9HB65 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ELL3Q9HB65 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ELL3Q9HB65 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ELL3Q9HB65 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ELL3Q9HB65 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.94□□□□□ -0.34
ELL3Q9HB65 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ELL3Q9HB65 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ELL3Q9HB65 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ELL3Q9HB65 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ELL3Q9HB65 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ELL3Q9HB65 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ELL3Q9HB65 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ELL3Q9HB65 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ELL3Q9HB65 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ELL3Q9HB65 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ELL3Q9HB65 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms