Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 MYADML-201ENST00000474610 2147 ntBASIC13.61□□□□□ -0.23
TRIM2Q9C040 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 AC079776.1-201ENST00000401540 1152 ntBASIC13.6□□□□□ -0.23
TRIM2Q9C040 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 ACA64.2-201ENST00000459014 129 ntBASIC13.6□□□□□ -0.23
TRIM2Q9C040 GCOM2-201ENST00000509133 1104 ntBASIC13.6□□□□□ -0.23
TRIM2Q9C040 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 MIR6074-201ENST00000612054 107 ntBASIC13.6□□□□□ -0.23
TRIM2Q9C040 AC145423.3-201ENST00000615987 467 ntBASIC13.6□□□□□ -0.23
TRIM2Q9C040 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRIM2Q9C040 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRIM2Q9C040 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 AC136759.1-202ENST00000530858 2194 ntBASIC13.59□□□□□ -0.23
TRIM2Q9C040 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 RN7SKP230-201ENST00000365642 335 ntBASIC13.59□□□□□ -0.23
TRIM2Q9C040 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 AC112492.5-201ENST00000421897 457 ntBASIC13.59□□□□□ -0.23
TRIM2Q9C040 TMEM14DP-201ENST00000422205 345 ntBASIC13.59□□□□□ -0.23
TRIM2Q9C040 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 AC007274.1-201ENST00000439805 662 ntBASIC13.59□□□□□ -0.23
TRIM2Q9C040 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 FTLP10-202ENST00000505798 471 ntBASIC13.59□□□□□ -0.23
TRIM2Q9C040 AC068587.3-201ENST00000526613 355 ntBASIC13.59□□□□□ -0.23
TRIM2Q9C040 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 TDH-203ENST00000531764 1110 ntBASIC13.59□□□□□ -0.23
TRIM2Q9C040 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM2Q9C040 RAB43P1-201ENST00000561790 589 ntBASIC13.59□□□□□ -0.23
TRIM2Q9C040 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.59□□□□□ -0.23
TRIM2Q9C040 AC138696.2-201ENST00000607376 223 ntBASIC13.59□□□□□ -0.23
TRIM2Q9C040 AC017083.2-201ENST00000608069 979 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms