Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FOXP3Q9BZS1 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 AC007969.1-201ENST00000433675 447 ntBASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 KRT43P-201ENST00000434019 910 ntBASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 FAM86LP-201ENST00000478302 853 ntBASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 USP32P1-208ENST00000506594 1164 ntBASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 AC104989.1-201ENST00000519711 778 ntBASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 AC133539.2-201ENST00000604757 467 ntBASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 BX539320.1-201ENST00000623759 877 ntBASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 REXO1L6P-201ENST00000603433 1515 ntBASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 AC089987.1-201ENST00000551654 2209 ntBASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.25■□□□□ 0.03
FOXP3Q9BZS1 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 BNIP3P42-201ENST00000454982 569 ntBASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 SLC25A47P1-201ENST00000531577 414 ntBASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 BNIP3P29-201ENST00000598302 571 ntBASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 AC011447.5-201ENST00000616168 564 ntBASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 AC138969.2-201ENST00000532739 9932 ntBASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FOXP3Q9BZS1 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms