Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 AC226150.1-201ENST00000544259 466 ntBASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 AC021016.3-201ENST00000608367 477 ntBASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 AC015688.4-201ENST00000580780 1647 ntBASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RTFDC1Q9BY42 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 AJ011931.1-201ENST00000618749 2492 ntBASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 BAX-205ENST00000391871 687 ntTSL 5 BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 PPP1R2P4-201ENST00000424051 595 ntBASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 HCG27-204ENST00000424675 895 ntTSL 3 BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 AC095040.1-201ENST00000513286 675 ntBASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 AC012073.1-201ENST00000606114 1108 ntBASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 LAP3P2-201ENST00000454686 1454 ntBASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 AC018442.1-201ENST00000421439 2061 ntBASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 AC023157.3-201ENST00000619086 2088 ntBASIC17.56■□□□□ 0.4
RTFDC1Q9BY42 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 AL672207.1-201ENST00000328462 1570 ntBASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 TCAF2P1-201ENST00000291129 2421 ntBASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 NAA40-205ENST00000539656 577 ntTSL 4 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 AL118516.1-201ENST00000564152 670 ntBASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 SKA2-205ENST00000580541 689 ntTSL 3 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 HKR1-225ENST00000592168 566 ntTSL 4 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 RNF146-211ENST00000609447 607 ntTSL 4 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 LINC00244-201ENST00000625073 613 ntBASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RTFDC1Q9BY42 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms