Protein–RNA interactions for Protein: Q9BV90

SNRNP25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, humanhuman

Known RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25Q9BV90 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNRNP25Q9BV90 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 AC099336.1-201ENST00000417053 1171 ntBASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 AC119751.2-201ENST00000504529 210 ntBASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 AC008825.2-201ENST00000603374 718 ntBASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 AC027601.3-201ENST00000622907 509 ntBASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 AL928921.2-201ENST00000641325 2442 ntBASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SNRNP25Q9BV90 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 AC016397.2-201ENST00000624848 1985 ntBASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 AL023775.1-201ENST00000454907 1746 ntBASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 AC022210.1-201ENST00000449856 793 ntBASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 AC027237.1-201ENST00000560942 655 ntBASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 AC020910.6-201ENST00000623084 1459 ntBASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 E2F3P2-201ENST00000447755 1422 ntBASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 AC009093.10-201ENST00000641956 1442 ntBASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNRNP25Q9BV90 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SNRNP25Q9BV90 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SNRNP25Q9BV90 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SNRNP25Q9BV90 GRK6P1-201ENST00000400595 1711 ntBASIC15.23■□□□□ 0.03
SNRNP25Q9BV90 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.23■□□□□ 0.03
SNRNP25Q9BV90 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.23■□□□□ 0.03
SNRNP25Q9BV90 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SNRNP25Q9BV90 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms