Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.5□□□□□ -0.09
NPAS2Q99743 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.5□□□□□ -0.09
NPAS2Q99743 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.5□□□□□ -0.09
NPAS2Q99743 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.5□□□□□ -0.09
NPAS2Q99743 HILS1-202ENST00000545329 423 ntBASIC14.5□□□□□ -0.09
NPAS2Q99743 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.5□□□□□ -0.09
NPAS2Q99743 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.5□□□□□ -0.09
NPAS2Q99743 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.5□□□□□ -0.09
NPAS2Q99743 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPAS2Q99743 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.5□□□□□ -0.09
NPAS2Q99743 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
NPAS2Q99743 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
NPAS2Q99743 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
NPAS2Q99743 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NPAS2Q99743 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NPAS2Q99743 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NPAS2Q99743 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPAS2Q99743 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPAS2Q99743 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPAS2Q99743 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPAS2Q99743 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPAS2Q99743 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPAS2Q99743 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPAS2Q99743 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NPAS2Q99743 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPAS2Q99743 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NPAS2Q99743 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.5□□□□□ -0.09
NPAS2Q99743 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.49□□□□□ -0.09
NPAS2Q99743 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
NPAS2Q99743 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 AC099521.3-201ENST00000624251 2938 ntBASIC14.49□□□□□ -0.09
NPAS2Q99743 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.49□□□□□ -0.09
NPAS2Q99743 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.49□□□□□ -0.09
NPAS2Q99743 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 CICP16-201ENST00000502609 2813 ntBASIC14.49□□□□□ -0.09
NPAS2Q99743 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.49□□□□□ -0.09
NPAS2Q99743 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.49□□□□□ -0.09
NPAS2Q99743 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.49□□□□□ -0.09
NPAS2Q99743 DGCR9-201ENST00000609630 2415 ntBASIC14.49□□□□□ -0.09
NPAS2Q99743 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NPAS2Q99743 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 AL442647.2-201ENST00000429864 857 ntBASIC14.49□□□□□ -0.09
NPAS2Q99743 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.49□□□□□ -0.09
NPAS2Q99743 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.49□□□□□ -0.09
NPAS2Q99743 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 AL359711.2-201ENST00000563105 872 ntBASIC14.49□□□□□ -0.09
NPAS2Q99743 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.49□□□□□ -0.09
NPAS2Q99743 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 AC090505.1-201ENST00000430515 1834 ntBASIC14.49□□□□□ -0.09
NPAS2Q99743 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 KRT8P22-201ENST00000562317 1415 ntBASIC14.49□□□□□ -0.09
NPAS2Q99743 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
NPAS2Q99743 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NPAS2Q99743 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.49□□□□□ -0.09
NPAS2Q99743 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
NPAS2Q99743 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.48□□□□□ -0.09
NPAS2Q99743 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.48□□□□□ -0.09
NPAS2Q99743 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.48□□□□□ -0.09
NPAS2Q99743 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
NPAS2Q99743 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
NPAS2Q99743 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
NPAS2Q99743 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NPAS2Q99743 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
NPAS2Q99743 AC112492.5-201ENST00000421897 457 ntBASIC14.48□□□□□ -0.09
NPAS2Q99743 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.48□□□□□ -0.09
NPAS2Q99743 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
NPAS2Q99743 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.48□□□□□ -0.09
NPAS2Q99743 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.48□□□□□ -0.09
NPAS2Q99743 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.48□□□□□ -0.09
NPAS2Q99743 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NPAS2Q99743 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.48□□□□□ -0.09
NPAS2Q99743 AC010319.3-201ENST00000597028 470 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms