Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
TRGV9Q99603 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.51□□□□□ -0.57
TRGV9Q99603 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
TRGV9Q99603 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.51□□□□□ -0.57
TRGV9Q99603 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
TRGV9Q99603 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
TRGV9Q99603 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
TRGV9Q99603 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV9Q99603 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV9Q99603 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.51□□□□□ -0.57
TRGV9Q99603 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV9Q99603 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.51□□□□□ -0.57
TRGV9Q99603 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 RN7SKP230-201ENST00000365642 335 ntBASIC11.51□□□□□ -0.57
TRGV9Q99603 PNMT-202ENST00000394246 821 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV9Q99603 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 DFFBP1-201ENST00000433250 979 ntBASIC11.51□□□□□ -0.57
TRGV9Q99603 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV9Q99603 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
TRGV9Q99603 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 AC123567.1-201ENST00000548294 1261 ntBASIC11.51□□□□□ -0.57
TRGV9Q99603 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV9Q99603 AC004466.1-201ENST00000599515 1080 ntBASIC11.51□□□□□ -0.57
TRGV9Q99603 TMEM261P1-201ENST00000604899 340 ntBASIC11.51□□□□□ -0.57
TRGV9Q99603 AC138696.2-201ENST00000607376 223 ntBASIC11.51□□□□□ -0.57
TRGV9Q99603 BX088702.1-201ENST00000610784 235 ntBASIC11.51□□□□□ -0.57
TRGV9Q99603 AC005252.2-201ENST00000624630 1141 ntBASIC11.51□□□□□ -0.57
TRGV9Q99603 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
TRGV9Q99603 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
TRGV9Q99603 CICP16-201ENST00000502609 2813 ntBASIC11.51□□□□□ -0.57
TRGV9Q99603 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
TRGV9Q99603 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV9Q99603 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.51□□□□□ -0.57
TRGV9Q99603 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 AL391825.1-201ENST00000457671 1364 ntBASIC11.51□□□□□ -0.57
TRGV9Q99603 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV9Q99603 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
TRGV9Q99603 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV9Q99603 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.51□□□□□ -0.57
TRGV9Q99603 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRGV9Q99603 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
TRGV9Q99603 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
TRGV9Q99603 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.5□□□□□ -0.57
TRGV9Q99603 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.5□□□□□ -0.57
TRGV9Q99603 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.5□□□□□ -0.57
TRGV9Q99603 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TRGV9Q99603 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
TRGV9Q99603 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
TRGV9Q99603 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
TRGV9Q99603 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.5□□□□□ -0.57
TRGV9Q99603 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 AC005252.3-201ENST00000623855 2258 ntBASIC11.5□□□□□ -0.57
TRGV9Q99603 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 NSL1-201ENST00000366976 722 ntTSL 2 BASIC11.5□□□□□ -0.57
TRGV9Q99603 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TRGV9Q99603 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC11.5□□□□□ -0.57
TRGV9Q99603 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms