Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
SNX18Q96RF0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SNX18Q96RF0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 AL157414.3-201ENST00000624276 1954 ntBASIC13.51□□□□□ -0.25
SNX18Q96RF0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 SPDYE19P-201ENST00000338590 713 ntBASIC13.51□□□□□ -0.25
SNX18Q96RF0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 DOC2GP-202ENST00000514950 1163 ntBASIC13.51□□□□□ -0.25
SNX18Q96RF0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 DUX4L47-201ENST00000566374 394 ntBASIC13.51□□□□□ -0.25
SNX18Q96RF0 AC140912.1-201ENST00000577171 1054 ntBASIC13.51□□□□□ -0.25
SNX18Q96RF0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 BX539320.1-201ENST00000623759 877 ntBASIC13.51□□□□□ -0.25
SNX18Q96RF0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 AC019294.4-201ENST00000561777 2905 ntBASIC13.51□□□□□ -0.25
SNX18Q96RF0 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SNX18Q96RF0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNX18Q96RF0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.5□□□□□ -0.25
SNX18Q96RF0 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
SNX18Q96RF0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNX18Q96RF0 KRT8P14-201ENST00000414254 1442 ntBASIC13.5□□□□□ -0.25
SNX18Q96RF0 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms