Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 KRT18P67-201ENST00000432816 1264 ntBASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 AF186996.4-201ENST00000467186 377 ntBASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 VENTXP1-201ENST00000569334 2716 ntBASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB3IPQ96QF0 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 Z98257.2-202ENST00000641138 1548 ntBASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 AC018712.1-201ENST00000455767 687 ntBASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 AC104692.2-201ENST00000603054 253 ntBASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 AC023141.13-201ENST00000604991 943 ntBASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 GOLGA2P5-201ENST00000266746 2395 ntBASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 AC106818.1-201ENST00000623223 3242 ntBASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RAB3IPQ96QF0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB3IPQ96QF0 HLA-H-201ENST00000383620 1096 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms