Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 AC011840.2-201ENST00000563063 1520 ntBASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHAMP1Q96JM3 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 AC009093.2-202ENST00000620513 2079 ntBASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 AC015909.5-201ENST00000624336 2266 ntBASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 PCDHA6-201ENST00000378126 3267 ntBASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 BASP1P1-201ENST00000430708 665 ntBASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 AC008761.3-201ENST00000624803 892 ntBASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 AL138725.1-201ENST00000407347 1314 ntBASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 HADH-202ENST00000403312 1752 ntTSL 5 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHAMP1Q96JM3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHAMP1Q96JM3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHAMP1Q96JM3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHAMP1Q96JM3 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CHAMP1Q96JM3 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHAMP1Q96JM3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHAMP1Q96JM3 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHAMP1Q96JM3 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHAMP1Q96JM3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC17.08■□□□□ 0.33
CHAMP1Q96JM3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
CHAMP1Q96JM3 GOLGA8IP-202ENST00000611635 2100 ntBASIC17.08■□□□□ 0.33
CHAMP1Q96JM3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.08■□□□□ 0.33
CHAMP1Q96JM3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
CHAMP1Q96JM3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
CHAMP1Q96JM3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 AC015818.8-201ENST00000587907 1519 ntBASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 MRPL37P1-201ENST00000592451 1337 ntBASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 AC134915.1-201ENST00000426461 574 ntBASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 AC027307.3-201ENST00000594262 1100 ntBASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 AL358472.5-202ENST00000641448 1267 ntBASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC17.08■□□□□ 0.32
CHAMP1Q96JM3 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms