Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 AL645933.1-201ENST00000440087 609 ntBASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 SCARNA21-201ENST00000517026 139 ntBASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 MIR4706-201ENST00000582134 82 ntBASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 AC005962.1-201ENST00000584100 773 ntBASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 AC015688.4-201ENST00000580780 1647 ntBASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.43■□□□□ 0.22
ATP6V0A1Q93050 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 ISCA2P1-201ENST00000425548 448 ntBASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 FTLP1-201ENST00000449155 526 ntBASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 AC020922.3-201ENST00000595064 547 ntBASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 AC128714.1-201ENST00000637035 887 ntBASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 OR2I1P-209ENST00000641730 5365 ntBASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP6V0A1Q93050 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 FAM90A7P-201ENST00000382628 1395 ntBASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 FAM90A23P-201ENST00000400136 1395 ntBASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 AL353637.1-201ENST00000451571 732 ntBASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 MPRIPP1-201ENST00000452433 1089 ntBASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.41■□□□□ 0.22
ATP6V0A1Q93050 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms