Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 LRRC6-201ENST00000250173 1672 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 AC112250.1-201ENST00000504640 745 ntBASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 MT3-202ENST00000561640 514 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 AC005586.2-201ENST00000563946 837 ntBASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 AL121845.4-201ENST00000613401 306 ntBASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 CCL19-202ENST00000378800 414 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 IQCF5-201ENST00000446461 512 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 AC133555.4-201ENST00000569081 152 ntBASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 ALOX12-AS1-203ENST00000570562 567 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 CBR3-AS1-205ENST00000608622 586 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 AC099063.4-201ENST00000641099 1602 ntBASIC5.69□□□□□ -1.5
SYNE2Q8WXH0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 LINC02012-201ENST00000608206 1725 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 RNA5SP358-201ENST00000362973 117 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 PPP1R2P9-201ENST00000378131 880 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 GYG2P1-203ENST00000382965 149 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 PPP1R2P4-201ENST00000424051 595 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 S100B-202ENST00000367071 971 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 RPL10-203ENST00000406022 748 ntTSL 3 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 MT1XP1-201ENST00000421314 186 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 RN7SL105P-201ENST00000475661 299 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 MEMO1-207ENST00000426310 1336 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 HTR7P1-202ENST00000624664 4411 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 RPL13AP5-201ENST00000439189 612 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 AL121929.1-201ENST00000457120 524 ntTSL 3 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 AC098591.1-202ENST00000507914 937 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 AC026464.4-201ENST00000570054 1284 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 ZNF548-207ENST00000597400 589 ntTSL 3 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 AC092115.1-201ENST00000566277 1402 ntBASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNE2Q8WXH0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms