Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
APH1BQ8WW43 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 AC118758.2-201ENST00000614242 2813 ntBASIC13.32□□□□□ -0.28
APH1BQ8WW43 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 AL139400.1-201ENST00000366220 510 ntBASIC13.32□□□□□ -0.28
APH1BQ8WW43 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 YBX1P5-201ENST00000509441 847 ntBASIC13.32□□□□□ -0.28
APH1BQ8WW43 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 TIMM17BP1-201ENST00000545713 516 ntBASIC13.32□□□□□ -0.28
APH1BQ8WW43 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
APH1BQ8WW43 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.32□□□□□ -0.28
APH1BQ8WW43 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APH1BQ8WW43 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APH1BQ8WW43 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
APH1BQ8WW43 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APH1BQ8WW43 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 MARK2P9-201ENST00000430958 1727 ntBASIC13.31□□□□□ -0.28
APH1BQ8WW43 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APH1BQ8WW43 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APH1BQ8WW43 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
APH1BQ8WW43 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APH1BQ8WW43 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
APH1BQ8WW43 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APH1BQ8WW43 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APH1BQ8WW43 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
APH1BQ8WW43 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 NUS1P3-201ENST00000423502 862 ntBASIC13.31□□□□□ -0.28
APH1BQ8WW43 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
APH1BQ8WW43 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
APH1BQ8WW43 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 AL512356.2-201ENST00000546955 174 ntBASIC13.31□□□□□ -0.28
APH1BQ8WW43 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.31□□□□□ -0.28
APH1BQ8WW43 AC005829.1-201ENST00000570002 483 ntBASIC13.31□□□□□ -0.28
APH1BQ8WW43 MIR4469-201ENST00000583919 79 ntBASIC13.31□□□□□ -0.28
APH1BQ8WW43 AC004835.2-201ENST00000603762 682 ntBASIC13.31□□□□□ -0.28
APH1BQ8WW43 AL844908.2-201ENST00000609461 460 ntBASIC13.31□□□□□ -0.28
APH1BQ8WW43 AL596442.2-201ENST00000610240 980 ntBASIC13.31□□□□□ -0.28
APH1BQ8WW43 AP001002.3-201ENST00000623482 206 ntBASIC13.31□□□□□ -0.28
APH1BQ8WW43 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms