Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 TSPY25P-201ENST00000429463 745 ntBASIC14.73□□□□□ -0.05
HMGB4Q8WW32 XBP1P1-201ENST00000436573 652 ntBASIC14.73□□□□□ -0.05
HMGB4Q8WW32 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 AL031713.1-201ENST00000564813 661 ntBASIC14.73□□□□□ -0.05
HMGB4Q8WW32 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 PHBP15-201ENST00000574228 665 ntBASIC14.73□□□□□ -0.05
HMGB4Q8WW32 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 AC007881.3-201ENST00000608897 607 ntBASIC14.73□□□□□ -0.05
HMGB4Q8WW32 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 YRDCP1-201ENST00000621419 643 ntBASIC14.73□□□□□ -0.05
HMGB4Q8WW32 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 AL161772.1-201ENST00000610494 4412 ntBASIC14.73□□□□□ -0.05
HMGB4Q8WW32 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGB4Q8WW32 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.72□□□□□ -0.05
HMGB4Q8WW32 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 KRT18P9-201ENST00000604826 1300 ntBASIC14.72□□□□□ -0.05
HMGB4Q8WW32 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 RPL7P35-201ENST00000446943 740 ntBASIC14.72□□□□□ -0.05
HMGB4Q8WW32 RN7SL818P-201ENST00000485099 259 ntBASIC14.72□□□□□ -0.05
HMGB4Q8WW32 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 PGAM1P5-201ENST00000548011 764 ntBASIC14.72□□□□□ -0.05
HMGB4Q8WW32 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 MIR3188-201ENST00000583494 85 ntBASIC14.72□□□□□ -0.05
HMGB4Q8WW32 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 AC138894.2-201ENST00000602838 371 ntBASIC14.72□□□□□ -0.05
HMGB4Q8WW32 RN7SL725P-201ENST00000606439 259 ntBASIC14.72□□□□□ -0.05
HMGB4Q8WW32 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HMGB4Q8WW32 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGB4Q8WW32 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGB4Q8WW32 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGB4Q8WW32 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGB4Q8WW32 MRPL37P1-201ENST00000592451 1337 ntBASIC14.71□□□□□ -0.05
HMGB4Q8WW32 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGB4Q8WW32 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGB4Q8WW32 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
HMGB4Q8WW32 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HMGB4Q8WW32 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
HMGB4Q8WW32 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGB4Q8WW32 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGB4Q8WW32 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGB4Q8WW32 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGB4Q8WW32 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGB4Q8WW32 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms