Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.5■□□□□ 0.39
SNED1Q8TER0 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC17.5■□□□□ 0.39
SNED1Q8TER0 COX5A-205ENST00000568517 582 ntTSL 3 BASIC17.5■□□□□ 0.39
SNED1Q8TER0 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC17.5■□□□□ 0.39
SNED1Q8TER0 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC17.5■□□□□ 0.39
SNED1Q8TER0 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SNED1Q8TER0 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.5■□□□□ 0.39
SNED1Q8TER0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.5■□□□□ 0.39
SNED1Q8TER0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC17.5■□□□□ 0.39
SNED1Q8TER0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.5■□□□□ 0.39
SNED1Q8TER0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
SNED1Q8TER0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SNED1Q8TER0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNED1Q8TER0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.49■□□□□ 0.39
SNED1Q8TER0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SNED1Q8TER0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.49■□□□□ 0.39
SNED1Q8TER0 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SNED1Q8TER0 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC17.49■□□□□ 0.39
SNED1Q8TER0 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC17.49■□□□□ 0.39
SNED1Q8TER0 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC17.49■□□□□ 0.39
SNED1Q8TER0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 RN7SL788P-201ENST00000460504 316 ntBASIC17.49■□□□□ 0.39
SNED1Q8TER0 AC025186.1-201ENST00000478174 870 ntBASIC17.49■□□□□ 0.39
SNED1Q8TER0 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.49■□□□□ 0.39
SNED1Q8TER0 ABHD17AP9-201ENST00000561925 548 ntBASIC17.49■□□□□ 0.39
SNED1Q8TER0 AP005264.6-204ENST00000588436 719 ntBASIC17.49■□□□□ 0.39
SNED1Q8TER0 DGAT2L7P-201ENST00000602462 744 ntBASIC17.49■□□□□ 0.39
SNED1Q8TER0 AL139339.2-201ENST00000608063 657 ntBASIC17.49■□□□□ 0.39
SNED1Q8TER0 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 AC091769.1-201ENST00000619576 568 ntBASIC17.49■□□□□ 0.39
SNED1Q8TER0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SNED1Q8TER0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC17.49■□□□□ 0.39
SNED1Q8TER0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
SNED1Q8TER0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SNED1Q8TER0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 AJ011931.1-201ENST00000618749 2492 ntBASIC17.49■□□□□ 0.39
SNED1Q8TER0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNED1Q8TER0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SNED1Q8TER0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.49■□□□□ 0.39
SNED1Q8TER0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SNED1Q8TER0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNED1Q8TER0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.48■□□□□ 0.39
SNED1Q8TER0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNED1Q8TER0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNED1Q8TER0 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNED1Q8TER0 PTGER4P2-201ENST00000328411 252 ntBASIC17.48■□□□□ 0.39
SNED1Q8TER0 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC17.48■□□□□ 0.39
SNED1Q8TER0 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC17.48■□□□□ 0.39
SNED1Q8TER0 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNED1Q8TER0 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNED1Q8TER0 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC17.48■□□□□ 0.39
SNED1Q8TER0 PTGER4P3-201ENST00000458150 252 ntBASIC17.48■□□□□ 0.39
SNED1Q8TER0 RN7SL767P-201ENST00000493013 295 ntBASIC17.48■□□□□ 0.39
SNED1Q8TER0 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC17.48■□□□□ 0.39
SNED1Q8TER0 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNED1Q8TER0 AC008972.2-201ENST00000606587 494 ntBASIC17.48■□□□□ 0.39
SNED1Q8TER0 AC021016.3-201ENST00000608367 477 ntBASIC17.48■□□□□ 0.39
SNED1Q8TER0 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNED1Q8TER0 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.48■□□□□ 0.39
SNED1Q8TER0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.48■□□□□ 0.39
SNED1Q8TER0 MSANTD2P1-201ENST00000445341 1368 ntBASIC17.48■□□□□ 0.39
SNED1Q8TER0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.48■□□□□ 0.39
SNED1Q8TER0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.48■□□□□ 0.39
SNED1Q8TER0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNED1Q8TER0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNED1Q8TER0 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SNED1Q8TER0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNED1Q8TER0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.48■□□□□ 0.39
SNED1Q8TER0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNED1Q8TER0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNED1Q8TER0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms