Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 HSPB1P2-201ENST00000448722 546 ntBASIC15.66■□□□□ 0.1
LMO3Q8TAP4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 RPSAP36-202ENST00000494591 1261 ntBASIC15.66■□□□□ 0.1
LMO3Q8TAP4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.66■□□□□ 0.1
LMO3Q8TAP4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 AC015818.8-201ENST00000587907 1519 ntBASIC15.66■□□□□ 0.1
LMO3Q8TAP4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LMO3Q8TAP4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 AL157996.1-201ENST00000624684 2299 ntBASIC15.65■□□□□ 0.1
LMO3Q8TAP4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 MIR658-201ENST00000385210 100 ntBASIC15.65■□□□□ 0.1
LMO3Q8TAP4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 YBX1P6-201ENST00000442962 1002 ntBASIC15.65■□□□□ 0.1
LMO3Q8TAP4 BNIP3P42-201ENST00000454982 569 ntBASIC15.65■□□□□ 0.1
LMO3Q8TAP4 RNA5SP412-201ENST00000516234 123 ntBASIC15.65■□□□□ 0.1
LMO3Q8TAP4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 AL160314.3-201ENST00000556041 767 ntBASIC15.65■□□□□ 0.1
LMO3Q8TAP4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 BNIP3P29-201ENST00000598302 571 ntBASIC15.65■□□□□ 0.1
LMO3Q8TAP4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 AC017083.2-201ENST00000608069 979 ntBASIC15.65■□□□□ 0.1
LMO3Q8TAP4 AC133552.6-201ENST00000613406 534 ntBASIC15.65■□□□□ 0.1
LMO3Q8TAP4 AC011447.5-201ENST00000616168 564 ntBASIC15.65■□□□□ 0.1
LMO3Q8TAP4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 AL359881.3-201ENST00000602640 1721 ntBASIC15.65■□□□□ 0.1
LMO3Q8TAP4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LMO3Q8TAP4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.1
LMO3Q8TAP4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
LMO3Q8TAP4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms