Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 AC139712.1-201ENST00000378256 1875 ntBASIC13.64□□□□□ -0.23
VRK2Q86Y07 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 TPM3P8-201ENST00000330554 643 ntBASIC13.64□□□□□ -0.23
VRK2Q86Y07 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 AL355864.2-201ENST00000447420 863 ntBASIC13.64□□□□□ -0.23
VRK2Q86Y07 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 ECM1P1-201ENST00000604092 1279 ntBASIC13.64□□□□□ -0.23
VRK2Q86Y07 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 AC104581.4-201ENST00000623126 3052 ntBASIC13.64□□□□□ -0.23
VRK2Q86Y07 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK2Q86Y07 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
VRK2Q86Y07 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.63□□□□□ -0.23
VRK2Q86Y07 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 AL590640.2-201ENST00000457038 527 ntBASIC13.63□□□□□ -0.23
VRK2Q86Y07 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 BX088702.1-201ENST00000610784 235 ntBASIC13.63□□□□□ -0.23
VRK2Q86Y07 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.63□□□□□ -0.23
VRK2Q86Y07 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 KHSRPP1-201ENST00000427983 1768 ntBASIC13.63□□□□□ -0.23
VRK2Q86Y07 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK2Q86Y07 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VRK2Q86Y07 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.62□□□□□ -0.23
VRK2Q86Y07 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms