Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 BCRP1-201ENST00000444246 691 ntBASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 SPDYE18-201ENST00000510091 1050 ntBASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 AC145098.2-201ENST00000623593 3026 ntBASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 AC152010.1-201ENST00000415779 2006 ntBASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TMEM53Q6P2H8 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 AC093004.1-201ENST00000508850 424 ntBASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
TMEM53Q6P2H8 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms