Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDKAL1Q5VV42 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 AC020658.7-201ENST00000624274 2442 ntBASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 MIR770-201ENST00000390219 98 ntBASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 DGCR5-201ENST00000399539 862 ntBASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 PTP4A1P2-201ENST00000546033 454 ntBASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 AC025279.2-201ENST00000569730 653 ntBASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 ECM1P1-201ENST00000604092 1279 ntBASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 BAP1-211ENST00000615113 489 ntBASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 NCLP1-201ENST00000445357 1963 ntBASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKAL1Q5VV42 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 AC002472.2-201ENST00000442739 958 ntBASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 AC190387.1-201ENST00000551683 408 ntBASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 TP53TG3HP-202ENST00000569755 579 ntBASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 AC132938.4-201ENST00000623835 848 ntBASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CDKAL1Q5VV42 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms