Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 HNRNPFP1-201ENST00000391730 1133 ntBASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 FAM86LP-201ENST00000478302 853 ntBASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 AC022616.1-201ENST00000518688 554 ntBASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 AC036164.1-201ENST00000570544 333 ntBASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 AL049840.4-201ENST00000602422 811 ntBASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 BX539320.1-201ENST00000623759 877 ntBASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 AL356585.2-201ENST00000625078 2396 ntBASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC00242Q5T6M2 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 AL157996.1-201ENST00000624684 2299 ntBASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 USP3-204ENST00000540797 5474 ntTSL 2 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 CNN2P2-201ENST00000443536 909 ntBASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 CNN2P3-201ENST00000450201 906 ntBASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 AC069120.2-201ENST00000524091 540 ntBASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 AL136317.3-201ENST00000618497 906 ntBASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 AL603764.1-201ENST00000636452 321 ntBASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC00242Q5T6M2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms