Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KCNA1Q09470 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KCNA1Q09470 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KCNA1Q09470 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.16■□□□□ 0.18
KCNA1Q09470 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.16■□□□□ 0.18
KCNA1Q09470 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KCNA1Q09470 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.16■□□□□ 0.18
KCNA1Q09470 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.16■□□□□ 0.18
KCNA1Q09470 EEF1DP1-201ENST00000585891 896 ntBASIC16.16■□□□□ 0.18
KCNA1Q09470 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.16■□□□□ 0.18
KCNA1Q09470 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.16■□□□□ 0.18
KCNA1Q09470 AL589935.2-201ENST00000616471 1231 ntBASIC16.16■□□□□ 0.18
KCNA1Q09470 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KCNA1Q09470 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.16■□□□□ 0.18
KCNA1Q09470 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
KCNA1Q09470 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
KCNA1Q09470 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KCNA1Q09470 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.16■□□□□ 0.18
KCNA1Q09470 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KCNA1Q09470 CICP16-201ENST00000502609 2813 ntBASIC16.16■□□□□ 0.18
KCNA1Q09470 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
KCNA1Q09470 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
KCNA1Q09470 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KCNA1Q09470 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
KCNA1Q09470 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KCNA1Q09470 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
KCNA1Q09470 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.15■□□□□ 0.18
KCNA1Q09470 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.15■□□□□ 0.18
KCNA1Q09470 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.15■□□□□ 0.18
KCNA1Q09470 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.15■□□□□ 0.18
KCNA1Q09470 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
KCNA1Q09470 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.15■□□□□ 0.18
KCNA1Q09470 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.15■□□□□ 0.18
KCNA1Q09470 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.15■□□□□ 0.18
KCNA1Q09470 RPS2P32-201ENST00000439199 892 ntBASIC16.15■□□□□ 0.18
KCNA1Q09470 GOLGA2P4-201ENST00000441462 777 ntBASIC16.15■□□□□ 0.18
KCNA1Q09470 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.15■□□□□ 0.18
KCNA1Q09470 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.15■□□□□ 0.18
KCNA1Q09470 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
KCNA1Q09470 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.15■□□□□ 0.18
KCNA1Q09470 DUX4L46-201ENST00000566845 751 ntBASIC16.15■□□□□ 0.18
KCNA1Q09470 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 RN7SL560P-201ENST00000577943 264 ntBASIC16.15■□□□□ 0.18
KCNA1Q09470 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 AC132192.2-201ENST00000596206 1147 ntBASIC16.15■□□□□ 0.18
KCNA1Q09470 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.15■□□□□ 0.18
KCNA1Q09470 AC008825.2-201ENST00000603374 718 ntBASIC16.15■□□□□ 0.18
KCNA1Q09470 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
KCNA1Q09470 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.15■□□□□ 0.18
KCNA1Q09470 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
KCNA1Q09470 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
KCNA1Q09470 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KCNA1Q09470 AC244394.1-201ENST00000435000 1665 ntBASIC16.14■□□□□ 0.18
KCNA1Q09470 AC015818.8-201ENST00000587907 1519 ntBASIC16.14■□□□□ 0.18
KCNA1Q09470 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
KCNA1Q09470 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KCNA1Q09470 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KCNA1Q09470 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
KCNA1Q09470 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
KCNA1Q09470 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KCNA1Q09470 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
KCNA1Q09470 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KCNA1Q09470 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KCNA1Q09470 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.14■□□□□ 0.17
KCNA1Q09470 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
KCNA1Q09470 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KCNA1Q09470 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.14■□□□□ 0.17
KCNA1Q09470 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KCNA1Q09470 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.14■□□□□ 0.17
KCNA1Q09470 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.14■□□□□ 0.17
KCNA1Q09470 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.14■□□□□ 0.17
KCNA1Q09470 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
KCNA1Q09470 FAM86HP-204ENST00000513466 959 ntBASIC16.14■□□□□ 0.17
KCNA1Q09470 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
KCNA1Q09470 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KCNA1Q09470 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.14■□□□□ 0.17
KCNA1Q09470 AL359881.2-201ENST00000602973 570 ntBASIC16.14■□□□□ 0.17
KCNA1Q09470 AC244157.2-201ENST00000616239 1006 ntBASIC16.14■□□□□ 0.17
KCNA1Q09470 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.14■□□□□ 0.17
KCNA1Q09470 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms