Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PRKCDQ05655 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
PRKCDQ05655 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
PRKCDQ05655 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PRKCDQ05655 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
PRKCDQ05655 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PRKCDQ05655 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PRKCDQ05655 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PRKCDQ05655 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.64□□□□□ -0.23
PRKCDQ05655 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
PRKCDQ05655 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PRKCDQ05655 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PRKCDQ05655 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
PRKCDQ05655 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.64□□□□□ -0.23
PRKCDQ05655 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PRKCDQ05655 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PRKCDQ05655 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PRKCDQ05655 KRT8P22-201ENST00000562317 1415 ntBASIC13.64□□□□□ -0.23
PRKCDQ05655 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PRKCDQ05655 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PRKCDQ05655 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PRKCDQ05655 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PRKCDQ05655 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PRKCDQ05655 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.63□□□□□ -0.23
PRKCDQ05655 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
PRKCDQ05655 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.63□□□□□ -0.23
PRKCDQ05655 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.63□□□□□ -0.23
PRKCDQ05655 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.63□□□□□ -0.23
PRKCDQ05655 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
PRKCDQ05655 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 RNU1-114P-201ENST00000365297 166 ntBASIC13.63□□□□□ -0.23
PRKCDQ05655 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.63□□□□□ -0.23
PRKCDQ05655 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 C1QBPP1-201ENST00000400117 770 ntBASIC13.63□□□□□ -0.23
PRKCDQ05655 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.63□□□□□ -0.23
PRKCDQ05655 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.63□□□□□ -0.23
PRKCDQ05655 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.63□□□□□ -0.23
PRKCDQ05655 AL442647.2-201ENST00000429864 857 ntBASIC13.63□□□□□ -0.23
PRKCDQ05655 GNAQP1-201ENST00000444815 1067 ntBASIC13.63□□□□□ -0.23
PRKCDQ05655 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.63□□□□□ -0.23
PRKCDQ05655 AC026434.2-201ENST00000506094 1078 ntBASIC13.63□□□□□ -0.23
PRKCDQ05655 AC093004.1-201ENST00000508850 424 ntBASIC13.63□□□□□ -0.23
PRKCDQ05655 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PRKCDQ05655 AP001582.1-201ENST00000525856 295 ntBASIC13.63□□□□□ -0.23
PRKCDQ05655 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.63□□□□□ -0.23
PRKCDQ05655 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.63□□□□□ -0.23
PRKCDQ05655 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.63□□□□□ -0.23
PRKCDQ05655 MIR8072-201ENST00000614241 80 ntBASIC13.63□□□□□ -0.23
PRKCDQ05655 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.63□□□□□ -0.23
PRKCDQ05655 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
PRKCDQ05655 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 AL023775.1-201ENST00000454907 1746 ntBASIC13.63□□□□□ -0.23
PRKCDQ05655 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.63□□□□□ -0.23
PRKCDQ05655 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
PRKCDQ05655 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.63□□□□□ -0.23
PRKCDQ05655 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.63□□□□□ -0.23
PRKCDQ05655 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKCDQ05655 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
PRKCDQ05655 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.63□□□□□ -0.23
PRKCDQ05655 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCDQ05655 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCDQ05655 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCDQ05655 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
PRKCDQ05655 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCDQ05655 CES1P1-201ENST00000421606 1704 ntBASIC13.62□□□□□ -0.23
PRKCDQ05655 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCDQ05655 SLC7A15P-201ENST00000424028 1363 ntBASIC13.62□□□□□ -0.23
PRKCDQ05655 AC016397.2-201ENST00000624848 1985 ntBASIC13.62□□□□□ -0.23
PRKCDQ05655 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCDQ05655 AC118758.2-201ENST00000614242 2813 ntBASIC13.62□□□□□ -0.23
PRKCDQ05655 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCDQ05655 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
PRKCDQ05655 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCDQ05655 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCDQ05655 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PRKCDQ05655 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCDQ05655 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PRKCDQ05655 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.62□□□□□ -0.23
PRKCDQ05655 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PRKCDQ05655 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.62□□□□□ -0.23
PRKCDQ05655 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.62□□□□□ -0.23
PRKCDQ05655 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.62□□□□□ -0.23
PRKCDQ05655 AC055876.2-201ENST00000531834 546 ntBASIC13.62□□□□□ -0.23
PRKCDQ05655 AC124283.3-201ENST00000570869 594 ntBASIC13.62□□□□□ -0.23
PRKCDQ05655 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.62□□□□□ -0.23
PRKCDQ05655 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms