Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCNA1P78396 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.57■□□□□ 0.24
CCNA1P78396 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.57■□□□□ 0.24
CCNA1P78396 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCNA1P78396 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCNA1P78396 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
CCNA1P78396 AC006504.5-208ENST00000588784 2401 ntBASIC16.57■□□□□ 0.24
CCNA1P78396 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.57■□□□□ 0.24
CCNA1P78396 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCNA1P78396 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
CCNA1P78396 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.57■□□□□ 0.24
CCNA1P78396 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCNA1P78396 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.57■□□□□ 0.24
CCNA1P78396 AC015688.4-201ENST00000580780 1647 ntBASIC16.57■□□□□ 0.24
CCNA1P78396 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCNA1P78396 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCNA1P78396 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCNA1P78396 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCNA1P78396 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CCNA1P78396 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CCNA1P78396 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.57■□□□□ 0.24
CCNA1P78396 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCNA1P78396 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.57■□□□□ 0.24
CCNA1P78396 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.57■□□□□ 0.24
CCNA1P78396 RPL18AP8-201ENST00000486071 528 ntBASIC16.57■□□□□ 0.24
CCNA1P78396 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.57■□□□□ 0.24
CCNA1P78396 CR383656.3-201ENST00000551315 183 ntBASIC16.57■□□□□ 0.24
CCNA1P78396 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.57■□□□□ 0.24
CCNA1P78396 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.57■□□□□ 0.24
CCNA1P78396 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.57■□□□□ 0.24
CCNA1P78396 NORAD-201ENST00000565493 5339 ntBASIC16.57■□□□□ 0.24
CCNA1P78396 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCNA1P78396 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCNA1P78396 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCNA1P78396 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.57■□□□□ 0.24
CCNA1P78396 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.57■□□□□ 0.24
CCNA1P78396 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCNA1P78396 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCNA1P78396 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CCNA1P78396 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.56■□□□□ 0.24
CCNA1P78396 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCNA1P78396 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCNA1P78396 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCNA1P78396 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.56■□□□□ 0.24
CCNA1P78396 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCNA1P78396 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCNA1P78396 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCNA1P78396 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCNA1P78396 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.56■□□□□ 0.24
CCNA1P78396 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCNA1P78396 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCNA1P78396 ERP29P1-201ENST00000442902 706 ntBASIC16.56■□□□□ 0.24
CCNA1P78396 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.56■□□□□ 0.24
CCNA1P78396 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.56■□□□□ 0.24
CCNA1P78396 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.56■□□□□ 0.24
CCNA1P78396 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.56■□□□□ 0.24
CCNA1P78396 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.56■□□□□ 0.24
CCNA1P78396 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.56■□□□□ 0.24
CCNA1P78396 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.56■□□□□ 0.24
CCNA1P78396 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.56■□□□□ 0.24
CCNA1P78396 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.56■□□□□ 0.24
CCNA1P78396 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.56■□□□□ 0.24
CCNA1P78396 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.56■□□□□ 0.24
CCNA1P78396 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.56■□□□□ 0.24
CCNA1P78396 AC090386.2-201ENST00000623010 1039 ntBASIC16.56■□□□□ 0.24
CCNA1P78396 AC138466.5-201ENST00000624002 808 ntBASIC16.56■□□□□ 0.24
CCNA1P78396 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCNA1P78396 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.56■□□□□ 0.24
CCNA1P78396 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCNA1P78396 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCNA1P78396 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCNA1P78396 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.56■□□□□ 0.24
CCNA1P78396 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.56■□□□□ 0.24
CCNA1P78396 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCNA1P78396 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCNA1P78396 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.56■□□□□ 0.24
CCNA1P78396 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCNA1P78396 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CCNA1P78396 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.56■□□□□ 0.24
CCNA1P78396 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCNA1P78396 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.55■□□□□ 0.24
CCNA1P78396 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCNA1P78396 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.55■□□□□ 0.24
CCNA1P78396 PCDHA3-202ENST00000532566 4594 ntBASIC16.55■□□□□ 0.24
CCNA1P78396 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCNA1P78396 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCNA1P78396 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CCNA1P78396 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.55■□□□□ 0.24
CCNA1P78396 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCNA1P78396 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCNA1P78396 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCNA1P78396 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCNA1P78396 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCNA1P78396 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CCNA1P78396 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCNA1P78396 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.55■□□□□ 0.24
CCNA1P78396 DPY19L2P5-201ENST00000456300 331 ntBASIC16.55■□□□□ 0.24
CCNA1P78396 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.55■□□□□ 0.24
CCNA1P78396 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms