Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.93□□□□□ -0.18
RPS3AP61247 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RPS3AP61247 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RPS3AP61247 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.93□□□□□ -0.18
RPS3AP61247 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.93□□□□□ -0.18
RPS3AP61247 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.93□□□□□ -0.18
RPS3AP61247 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.93□□□□□ -0.18
RPS3AP61247 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.93□□□□□ -0.18
RPS3AP61247 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.93□□□□□ -0.18
RPS3AP61247 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.93□□□□□ -0.18
RPS3AP61247 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.93□□□□□ -0.18
RPS3AP61247 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.93□□□□□ -0.18
RPS3AP61247 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.93□□□□□ -0.18
RPS3AP61247 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.93□□□□□ -0.18
RPS3AP61247 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RPS3AP61247 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.93□□□□□ -0.18
RPS3AP61247 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.93□□□□□ -0.18
RPS3AP61247 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
RPS3AP61247 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.93□□□□□ -0.18
RPS3AP61247 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.93□□□□□ -0.18
RPS3AP61247 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RPS3AP61247 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.93□□□□□ -0.18
RPS3AP61247 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RPS3AP61247 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.93□□□□□ -0.18
RPS3AP61247 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.93□□□□□ -0.18
RPS3AP61247 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPS3AP61247 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.93□□□□□ -0.18
RPS3AP61247 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.93□□□□□ -0.18
RPS3AP61247 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RPS3AP61247 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RPS3AP61247 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
RPS3AP61247 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 TTTY23B-201ENST00000442790 549 ntBASIC13.92□□□□□ -0.18
RPS3AP61247 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.92□□□□□ -0.18
RPS3AP61247 RN7SL837P-201ENST00000463010 287 ntBASIC13.92□□□□□ -0.18
RPS3AP61247 GIMAP3P-201ENST00000495150 836 ntBASIC13.92□□□□□ -0.18
RPS3AP61247 AC026410.3-201ENST00000514280 936 ntBASIC13.92□□□□□ -0.18
RPS3AP61247 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.92□□□□□ -0.18
RPS3AP61247 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.92□□□□□ -0.18
RPS3AP61247 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.92□□□□□ -0.18
RPS3AP61247 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.92□□□□□ -0.18
RPS3AP61247 AC015936.2-201ENST00000593177 259 ntBASIC13.92□□□□□ -0.18
RPS3AP61247 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
RPS3AP61247 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.92□□□□□ -0.18
RPS3AP61247 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
RPS3AP61247 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.92□□□□□ -0.18
RPS3AP61247 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 AC084364.1-201ENST00000551967 1556 ntBASIC13.92□□□□□ -0.18
RPS3AP61247 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.92□□□□□ -0.18
RPS3AP61247 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RPS3AP61247 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.91□□□□□ -0.18
RPS3AP61247 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 AC019294.4-201ENST00000561777 2905 ntBASIC13.91□□□□□ -0.18
RPS3AP61247 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.91□□□□□ -0.18
RPS3AP61247 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPS3AP61247 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RPS3AP61247 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RPS3AP61247 DRD5P1-201ENST00000456605 1438 ntBASIC13.91□□□□□ -0.18
RPS3AP61247 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RPS3AP61247 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms