Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 NKAIN1P1-201ENST00000435754 582 ntBASIC16.91■□□□□ 0.3
CHMP4BP1P59074 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.91■□□□□ 0.3
CHMP4BP1P59074 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP4BP1P59074 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 AL662890.1-201ENST00000396818 632 ntBASIC16.9■□□□□ 0.3
CHMP4BP1P59074 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 BX284668.4-201ENST00000453917 508 ntBASIC16.9■□□□□ 0.3
CHMP4BP1P59074 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP4BP1P59074 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHMP4BP1P59074 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CHMP4BP1P59074 AC023024.2-201ENST00000623561 1993 ntBASIC16.89■□□□□ 0.3
CHMP4BP1P59074 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CHMP4BP1P59074 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms