Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP1S2P56377 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
AP1S2P56377 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 AC006504.5-208ENST00000588784 2401 ntBASIC14.35□□□□□ -0.11
AP1S2P56377 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.35□□□□□ -0.11
AP1S2P56377 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.35□□□□□ -0.11
AP1S2P56377 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S2P56377 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
AP1S2P56377 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.35□□□□□ -0.11
AP1S2P56377 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.35□□□□□ -0.11
AP1S2P56377 KLF2P4-201ENST00000451959 1225 ntBASIC14.35□□□□□ -0.11
AP1S2P56377 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.35□□□□□ -0.11
AP1S2P56377 KRT17P8-201ENST00000540749 863 ntBASIC14.35□□□□□ -0.11
AP1S2P56377 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S2P56377 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 AC023310.1-201ENST00000554836 735 ntBASIC14.35□□□□□ -0.11
AP1S2P56377 SORD2P-201ENST00000558556 1069 ntBASIC14.35□□□□□ -0.11
AP1S2P56377 MIR4683-201ENST00000579659 81 ntBASIC14.35□□□□□ -0.11
AP1S2P56377 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.35□□□□□ -0.11
AP1S2P56377 AL358472.3-201ENST00000608147 415 ntBASIC14.35□□□□□ -0.11
AP1S2P56377 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S2P56377 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.35□□□□□ -0.11
AP1S2P56377 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
AP1S2P56377 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S2P56377 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S2P56377 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S2P56377 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
AP1S2P56377 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 AC027601.5-201ENST00000624065 2482 ntBASIC14.35□□□□□ -0.11
AP1S2P56377 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.35□□□□□ -0.11
AP1S2P56377 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S2P56377 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
AP1S2P56377 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.35□□□□□ -0.11
AP1S2P56377 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AP1S2P56377 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
AP1S2P56377 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.34□□□□□ -0.11
AP1S2P56377 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.34□□□□□ -0.11
AP1S2P56377 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
AP1S2P56377 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
AP1S2P56377 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.34□□□□□ -0.11
AP1S2P56377 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
AP1S2P56377 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 AC010141.1-201ENST00000411585 623 ntBASIC14.34□□□□□ -0.11
AP1S2P56377 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
AP1S2P56377 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.34□□□□□ -0.11
AP1S2P56377 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.34□□□□□ -0.11
AP1S2P56377 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.34□□□□□ -0.11
AP1S2P56377 CNN2P10-201ENST00000443067 918 ntBASIC14.34□□□□□ -0.11
AP1S2P56377 CROCCP4-201ENST00000457096 498 ntBASIC14.34□□□□□ -0.11
AP1S2P56377 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.34□□□□□ -0.11
AP1S2P56377 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.34□□□□□ -0.11
AP1S2P56377 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.34□□□□□ -0.11
AP1S2P56377 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.34□□□□□ -0.11
AP1S2P56377 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.34□□□□□ -0.11
AP1S2P56377 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.34□□□□□ -0.11
AP1S2P56377 PPY2P-201ENST00000582808 702 ntBASIC14.34□□□□□ -0.11
AP1S2P56377 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
AP1S2P56377 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.34□□□□□ -0.11
AP1S2P56377 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.34□□□□□ -0.11
AP1S2P56377 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 AC008687.7-202ENST00000637404 953 ntBASIC14.34□□□□□ -0.11
AP1S2P56377 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.34□□□□□ -0.11
AP1S2P56377 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.34□□□□□ -0.11
AP1S2P56377 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
AP1S2P56377 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP1S2P56377 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms