Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.3□□□□□ -0.28
SUMO3P55854 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.3□□□□□ -0.28
SUMO3P55854 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.3□□□□□ -0.28
SUMO3P55854 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SUMO3P55854 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.3□□□□□ -0.28
SUMO3P55854 AP000346.4-201ENST00000614827 381 ntBASIC13.3□□□□□ -0.28
SUMO3P55854 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SUMO3P55854 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
SUMO3P55854 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.3□□□□□ -0.28
SUMO3P55854 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.3□□□□□ -0.28
SUMO3P55854 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.3□□□□□ -0.28
SUMO3P55854 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SUMO3P55854 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.3□□□□□ -0.28
SUMO3P55854 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SUMO3P55854 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.3□□□□□ -0.28
SUMO3P55854 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.3□□□□□ -0.28
SUMO3P55854 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.3□□□□□ -0.28
SUMO3P55854 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SUMO3P55854 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SUMO3P55854 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SUMO3P55854 AC007326.2-201ENST00000624224 7579 ntBASIC13.29□□□□□ -0.28
SUMO3P55854 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SUMO3P55854 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.29□□□□□ -0.28
SUMO3P55854 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 AC097359.2-201ENST00000604992 2389 ntBASIC13.29□□□□□ -0.28
SUMO3P55854 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SUMO3P55854 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SUMO3P55854 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
SUMO3P55854 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SUMO3P55854 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SUMO3P55854 MIR663B-201ENST00000408361 115 ntBASIC13.29□□□□□ -0.28
SUMO3P55854 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.29□□□□□ -0.28
SUMO3P55854 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.29□□□□□ -0.28
SUMO3P55854 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.29□□□□□ -0.28
SUMO3P55854 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.29□□□□□ -0.28
SUMO3P55854 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.29□□□□□ -0.28
SUMO3P55854 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.29□□□□□ -0.28
SUMO3P55854 RPL13AP20-201ENST00000459725 609 ntBASIC13.29□□□□□ -0.28
SUMO3P55854 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SUMO3P55854 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.29□□□□□ -0.28
SUMO3P55854 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.29□□□□□ -0.28
SUMO3P55854 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.29□□□□□ -0.28
SUMO3P55854 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.29□□□□□ -0.28
SUMO3P55854 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 MIR4783-201ENST00000580343 82 ntBASIC13.29□□□□□ -0.28
SUMO3P55854 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.29□□□□□ -0.28
SUMO3P55854 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.29□□□□□ -0.28
SUMO3P55854 AC104506.1-201ENST00000609247 429 ntBASIC13.29□□□□□ -0.28
SUMO3P55854 MIR6752-201ENST00000618442 71 ntBASIC13.29□□□□□ -0.28
SUMO3P55854 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.29□□□□□ -0.28
SUMO3P55854 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.29□□□□□ -0.28
SUMO3P55854 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.29□□□□□ -0.28
SUMO3P55854 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
SUMO3P55854 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.29□□□□□ -0.28
SUMO3P55854 AL008718.2-201ENST00000609206 1313 ntBASIC13.29□□□□□ -0.28
SUMO3P55854 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.29□□□□□ -0.28
SUMO3P55854 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
SUMO3P55854 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 KRT8P29-201ENST00000420409 1371 ntBASIC13.29□□□□□ -0.28
SUMO3P55854 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.29□□□□□ -0.28
SUMO3P55854 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SUMO3P55854 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SUMO3P55854 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.29□□□□□ -0.28
SUMO3P55854 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms