Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL592076.1-201ENST00000424448 303 ntBASIC15.29■□□□□ 0.04
EPHB3P54753 RPL8P2-201ENST00000430538 502 ntBASIC15.29■□□□□ 0.04
EPHB3P54753 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.29■□□□□ 0.04
EPHB3P54753 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.29■□□□□ 0.04
EPHB3P54753 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.29■□□□□ 0.04
EPHB3P54753 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.29■□□□□ 0.04
EPHB3P54753 AC124068.2-201ENST00000569473 1109 ntBASIC15.29■□□□□ 0.04
EPHB3P54753 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
EPHB3P54753 SPCS2P2-201ENST00000603270 608 ntBASIC15.29■□□□□ 0.04
EPHB3P54753 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
EPHB3P54753 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.29■□□□□ 0.04
EPHB3P54753 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 AC023157.3-201ENST00000619086 2088 ntBASIC15.29■□□□□ 0.04
EPHB3P54753 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
EPHB3P54753 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
EPHB3P54753 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
EPHB3P54753 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.29■□□□□ 0.04
EPHB3P54753 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.28■□□□□ 0.04
EPHB3P54753 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
EPHB3P54753 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
EPHB3P54753 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
EPHB3P54753 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.28■□□□□ 0.04
EPHB3P54753 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
EPHB3P54753 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 RNA5SP359-201ENST00000364838 113 ntBASIC15.28■□□□□ 0.04
EPHB3P54753 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.28■□□□□ 0.04
EPHB3P54753 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHB3P54753 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.28■□□□□ 0.04
EPHB3P54753 FGFR3P1-201ENST00000449999 601 ntBASIC15.28■□□□□ 0.04
EPHB3P54753 NOC2LP1-201ENST00000450578 752 ntBASIC15.28■□□□□ 0.04
EPHB3P54753 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHB3P54753 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.28■□□□□ 0.04
EPHB3P54753 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHB3P54753 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.28■□□□□ 0.04
EPHB3P54753 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHB3P54753 AC027237.1-201ENST00000560942 655 ntBASIC15.28■□□□□ 0.04
EPHB3P54753 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
EPHB3P54753 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.28■□□□□ 0.04
EPHB3P54753 MEG3_2.1-201ENST00000611456 105 ntBASIC15.28■□□□□ 0.04
EPHB3P54753 AC051619.9-201ENST00000623237 597 ntBASIC15.28■□□□□ 0.04
EPHB3P54753 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHB3P54753 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHB3P54753 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.28■□□□□ 0.04
EPHB3P54753 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
EPHB3P54753 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
EPHB3P54753 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHB3P54753 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.27■□□□□ 0.04
EPHB3P54753 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHB3P54753 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.27■□□□□ 0.04
EPHB3P54753 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EPHB3P54753 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EPHB3P54753 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EPHB3P54753 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHB3P54753 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EPHB3P54753 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EPHB3P54753 LINC00528-201ENST00000600723 2160 ntBASIC15.27■□□□□ 0.04
EPHB3P54753 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EPHB3P54753 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.27■□□□□ 0.04
EPHB3P54753 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
EPHB3P54753 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
EPHB3P54753 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EPHB3P54753 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EPHB3P54753 BANF1P3-201ENST00000412556 261 ntBASIC15.27■□□□□ 0.04
EPHB3P54753 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms