Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.17■□□□□ 0.02
ATXN3P54252 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.17■□□□□ 0.02
ATXN3P54252 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ATXN3P54252 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ATXN3P54252 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.17■□□□□ 0.02
ATXN3P54252 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.17■□□□□ 0.02
ATXN3P54252 AC148477.4-201ENST00000613430 1793 ntBASIC15.17■□□□□ 0.02
ATXN3P54252 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
ATXN3P54252 ACTBP8-201ENST00000403258 1108 ntBASIC15.17■□□□□ 0.02
ATXN3P54252 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.17■□□□□ 0.02
ATXN3P54252 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.17■□□□□ 0.02
ATXN3P54252 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.17■□□□□ 0.02
ATXN3P54252 Z97180.1-201ENST00000445173 988 ntBASIC15.17■□□□□ 0.02
ATXN3P54252 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
ATXN3P54252 COX5BP1-201ENST00000507622 393 ntBASIC15.17■□□□□ 0.02
ATXN3P54252 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.17■□□□□ 0.02
ATXN3P54252 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ATXN3P54252 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.17■□□□□ 0.02
ATXN3P54252 AC007663.3-201ENST00000609632 465 ntBASIC15.17■□□□□ 0.02
ATXN3P54252 AL353726.2-201ENST00000623259 884 ntBASIC15.17■□□□□ 0.02
ATXN3P54252 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
ATXN3P54252 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
ATXN3P54252 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.17■□□□□ 0.02
ATXN3P54252 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.17■□□□□ 0.02
ATXN3P54252 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.17■□□□□ 0.02
ATXN3P54252 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ATXN3P54252 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
ATXN3P54252 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ATXN3P54252 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATXN3P54252 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ATXN3P54252 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
ATXN3P54252 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.16■□□□□ 0.02
ATXN3P54252 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
ATXN3P54252 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.16■□□□□ 0.02
ATXN3P54252 AC041040.2-201ENST00000622926 2899 ntBASIC15.16■□□□□ 0.02
ATXN3P54252 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
ATXN3P54252 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
ATXN3P54252 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.16■□□□□ 0.02
ATXN3P54252 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
ATXN3P54252 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 KLF2P2-201ENST00000416807 1039 ntBASIC15.16■□□□□ 0.02
ATXN3P54252 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.16■□□□□ 0.02
ATXN3P54252 CNN2P10-201ENST00000443067 918 ntBASIC15.16■□□□□ 0.02
ATXN3P54252 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.16■□□□□ 0.02
ATXN3P54252 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.16■□□□□ 0.02
ATXN3P54252 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.16■□□□□ 0.02
ATXN3P54252 AC244157.2-201ENST00000616239 1006 ntBASIC15.16■□□□□ 0.02
ATXN3P54252 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.16■□□□□ 0.02
ATXN3P54252 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
ATXN3P54252 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.16■□□□□ 0.02
ATXN3P54252 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.16■□□□□ 0.02
ATXN3P54252 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ATXN3P54252 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ATXN3P54252 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.16■□□□□ 0.02
ATXN3P54252 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ATXN3P54252 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms