Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLCSP50747 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.17□□□□□ -0.14
HLCSP50747 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.17□□□□□ -0.14
HLCSP50747 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HLCSP50747 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLCSP50747 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.17□□□□□ -0.14
HLCSP50747 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HLCSP50747 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLCSP50747 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLCSP50747 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLCSP50747 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HLCSP50747 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLCSP50747 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
HLCSP50747 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLCSP50747 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.17□□□□□ -0.14
HLCSP50747 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.17□□□□□ -0.14
HLCSP50747 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.17□□□□□ -0.14
HLCSP50747 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLCSP50747 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.16□□□□□ -0.14
HLCSP50747 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.16□□□□□ -0.14
HLCSP50747 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HLCSP50747 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.16□□□□□ -0.14
HLCSP50747 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HLCSP50747 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.16□□□□□ -0.14
HLCSP50747 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.16□□□□□ -0.14
HLCSP50747 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.16□□□□□ -0.14
HLCSP50747 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.16□□□□□ -0.14
HLCSP50747 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
HLCSP50747 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
HLCSP50747 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.16□□□□□ -0.14
HLCSP50747 C2orf27AP3-201ENST00000434123 579 ntBASIC14.16□□□□□ -0.14
HLCSP50747 RPL7P3-201ENST00000441388 714 ntBASIC14.16□□□□□ -0.14
HLCSP50747 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
HLCSP50747 TPT1P11-201ENST00000458482 498 ntBASIC14.16□□□□□ -0.14
HLCSP50747 AC106760.1-201ENST00000508690 800 ntBASIC14.16□□□□□ -0.14
HLCSP50747 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.16□□□□□ -0.14
HLCSP50747 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.16□□□□□ -0.14
HLCSP50747 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.16□□□□□ -0.14
HLCSP50747 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.16□□□□□ -0.14
HLCSP50747 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.16□□□□□ -0.14
HLCSP50747 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.16□□□□□ -0.14
HLCSP50747 AL354718.3-201ENST00000616414 581 ntBASIC14.16□□□□□ -0.14
HLCSP50747 CR382287.1-201ENST00000623954 586 ntBASIC14.16□□□□□ -0.14
HLCSP50747 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HLCSP50747 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.16□□□□□ -0.14
HLCSP50747 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HLCSP50747 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.16□□□□□ -0.14
HLCSP50747 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLCSP50747 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.16□□□□□ -0.14
HLCSP50747 AC015818.8-201ENST00000587907 1519 ntBASIC14.15□□□□□ -0.14
HLCSP50747 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.15□□□□□ -0.14
HLCSP50747 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.15□□□□□ -0.14
HLCSP50747 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLCSP50747 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.15□□□□□ -0.14
HLCSP50747 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLCSP50747 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLCSP50747 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLCSP50747 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLCSP50747 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HLCSP50747 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLCSP50747 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLCSP50747 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLCSP50747 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLCSP50747 AL591122.2-201ENST00000624125 1853 ntBASIC14.15□□□□□ -0.14
HLCSP50747 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.15□□□□□ -0.14
HLCSP50747 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.15□□□□□ -0.14
HLCSP50747 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLCSP50747 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.15□□□□□ -0.14
HLCSP50747 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.15□□□□□ -0.14
HLCSP50747 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.15□□□□□ -0.14
HLCSP50747 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HLCSP50747 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.15□□□□□ -0.14
HLCSP50747 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLCSP50747 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HLCSP50747 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.15□□□□□ -0.14
HLCSP50747 AC114812.1-204ENST00000449669 728 ntBASIC14.15□□□□□ -0.14
HLCSP50747 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
HLCSP50747 FTH1P14-201ENST00000482930 551 ntBASIC14.15□□□□□ -0.14
HLCSP50747 AC004066.1-201ENST00000502488 802 ntBASIC14.15□□□□□ -0.14
HLCSP50747 AP000812.2-201ENST00000538934 718 ntBASIC14.15□□□□□ -0.14
HLCSP50747 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms