Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 AC068587.3-201ENST00000526613 355 ntBASIC13.17□□□□□ -0.3
CDKN2AP42771 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.17□□□□□ -0.3
CDKN2AP42771 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.17□□□□□ -0.3
CDKN2AP42771 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN2AP42771 AC010319.3-201ENST00000597028 470 ntBASIC13.17□□□□□ -0.3
CDKN2AP42771 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN2AP42771 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.17□□□□□ -0.3
CDKN2AP42771 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.17□□□□□ -0.3
CDKN2AP42771 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CDKN2AP42771 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN2AP42771 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN2AP42771 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN2AP42771 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN2AP42771 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CDKN2AP42771 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN2AP42771 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN2AP42771 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.17□□□□□ -0.3
CDKN2AP42771 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDKN2AP42771 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.17□□□□□ -0.3
CDKN2AP42771 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.17□□□□□ -0.3
CDKN2AP42771 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.17□□□□□ -0.3
CDKN2AP42771 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CDKN2AP42771 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CDKN2AP42771 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 AL590440.2-201ENST00000641973 1595 ntBASIC13.16□□□□□ -0.3
CDKN2AP42771 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 AP000593.2-201ENST00000542775 1433 ntBASIC13.16□□□□□ -0.3
CDKN2AP42771 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CDKN2AP42771 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CDKN2AP42771 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.16□□□□□ -0.3
CDKN2AP42771 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.16□□□□□ -0.3
CDKN2AP42771 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.16□□□□□ -0.3
CDKN2AP42771 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.16□□□□□ -0.3
CDKN2AP42771 AC106760.1-201ENST00000508690 800 ntBASIC13.16□□□□□ -0.3
CDKN2AP42771 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.16□□□□□ -0.3
CDKN2AP42771 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.16□□□□□ -0.3
CDKN2AP42771 SORD2P-201ENST00000558556 1069 ntBASIC13.16□□□□□ -0.3
CDKN2AP42771 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.16□□□□□ -0.3
CDKN2AP42771 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.16□□□□□ -0.3
CDKN2AP42771 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.16□□□□□ -0.3
CDKN2AP42771 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.16□□□□□ -0.3
CDKN2AP42771 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.16□□□□□ -0.3
CDKN2AP42771 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.16□□□□□ -0.3
CDKN2AP42771 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CDKN2AP42771 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CDKN2AP42771 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CDKN2AP42771 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.16□□□□□ -0.3
CDKN2AP42771 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.16□□□□□ -0.3
CDKN2AP42771 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CDKN2AP42771 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CDKN2AP42771 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CDKN2AP42771 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDKN2AP42771 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.16□□□□□ -0.3
CDKN2AP42771 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.15□□□□□ -0.3
CDKN2AP42771 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.15□□□□□ -0.3
CDKN2AP42771 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.15□□□□□ -0.3
CDKN2AP42771 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.15□□□□□ -0.3
CDKN2AP42771 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CDKN2AP42771 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.15□□□□□ -0.3
CDKN2AP42771 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CDKN2AP42771 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms