Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
NCAPD3P42695 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
NCAPD3P42695 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NCAPD3P42695 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
NCAPD3P42695 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NCAPD3P42695 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC24.92■■□□□ 1.58
NCAPD3P42695 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
NCAPD3P42695 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NCAPD3P42695 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
NCAPD3P42695 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.92■■□□□ 1.58
NCAPD3P42695 GSN-206ENST00000394353 2311 ntTSL 2 BASIC24.92■■□□□ 1.58
NCAPD3P42695 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC24.92■■□□□ 1.58
NCAPD3P42695 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
NCAPD3P42695 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
NCAPD3P42695 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
NCAPD3P42695 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC24.91■■□□□ 1.58
NCAPD3P42695 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC24.91■■□□□ 1.58
NCAPD3P42695 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC24.91■■□□□ 1.58
NCAPD3P42695 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC24.91■■□□□ 1.58
NCAPD3P42695 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
NCAPD3P42695 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
NCAPD3P42695 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC24.91■■□□□ 1.58
NCAPD3P42695 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NCAPD3P42695 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC24.91■■□□□ 1.58
NCAPD3P42695 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
NCAPD3P42695 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NCAPD3P42695 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NCAPD3P42695 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC24.91■■□□□ 1.58
NCAPD3P42695 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NCAPD3P42695 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC24.91■■□□□ 1.58
NCAPD3P42695 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC24.91■■□□□ 1.58
NCAPD3P42695 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC24.91■■□□□ 1.58
NCAPD3P42695 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
NCAPD3P42695 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC24.9■■□□□ 1.58
NCAPD3P42695 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC24.9■■□□□ 1.58
NCAPD3P42695 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
NCAPD3P42695 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NCAPD3P42695 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NCAPD3P42695 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NCAPD3P42695 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NCAPD3P42695 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
NCAPD3P42695 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC24.9■■□□□ 1.58
NCAPD3P42695 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NCAPD3P42695 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
NCAPD3P42695 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
NCAPD3P42695 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
NCAPD3P42695 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NCAPD3P42695 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC24.9■■□□□ 1.58
NCAPD3P42695 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC24.9■■□□□ 1.58
NCAPD3P42695 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NCAPD3P42695 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NCAPD3P42695 AC064850.1-201ENST00000413279 1398 ntBASIC24.9■■□□□ 1.58
NCAPD3P42695 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
NCAPD3P42695 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC24.89■■□□□ 1.58
NCAPD3P42695 BX088651.3-201ENST00000418155 352 ntBASIC24.89■■□□□ 1.58
NCAPD3P42695 HNRNPA3P12-201ENST00000437410 1063 ntBASIC24.89■■□□□ 1.58
NCAPD3P42695 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
NCAPD3P42695 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC24.89■■□□□ 1.58
NCAPD3P42695 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC24.89■■□□□ 1.58
NCAPD3P42695 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC24.89■■□□□ 1.58
NCAPD3P42695 NAT9-219ENST00000582524 573 ntTSL 4 BASIC24.89■■□□□ 1.58
NCAPD3P42695 RPS5-205ENST00000598495 800 ntTSL 3 BASIC24.89■■□□□ 1.58
NCAPD3P42695 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC24.89■■□□□ 1.58
NCAPD3P42695 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC24.89■■□□□ 1.58
NCAPD3P42695 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
NCAPD3P42695 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
NCAPD3P42695 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
NCAPD3P42695 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
NCAPD3P42695 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
NCAPD3P42695 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC24.89■■□□□ 1.58
NCAPD3P42695 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
NCAPD3P42695 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
NCAPD3P42695 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC24.89■■□□□ 1.57
NCAPD3P42695 PRAL-201ENST00000624952 3286 ntBASIC24.89■■□□□ 1.57
NCAPD3P42695 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC24.89■■□□□ 1.57
NCAPD3P42695 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
NCAPD3P42695 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
NCAPD3P42695 AC215219.1-201ENST00000400706 1817 ntBASIC24.89■■□□□ 1.57
NCAPD3P42695 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC24.89■■□□□ 1.57
NCAPD3P42695 MPV17-209ENST00000405983 859 ntTSL 5 BASIC24.89■■□□□ 1.57
NCAPD3P42695 SAP18P2-201ENST00000434334 459 ntBASIC24.89■■□□□ 1.57
NCAPD3P42695 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC24.89■■□□□ 1.57
NCAPD3P42695 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC24.89■■□□□ 1.57
NCAPD3P42695 SLC25A15P1-201ENST00000456738 342 ntBASIC24.89■■□□□ 1.57
NCAPD3P42695 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC24.89■■□□□ 1.57
NCAPD3P42695 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC24.89■■□□□ 1.57
NCAPD3P42695 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC24.89■■□□□ 1.57
NCAPD3P42695 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC24.89■■□□□ 1.57
NCAPD3P42695 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC24.89■■□□□ 1.57
NCAPD3P42695 MEP1AP1-201ENST00000636082 1097 ntBASIC24.89■■□□□ 1.57
NCAPD3P42695 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
NCAPD3P42695 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC24.89■■□□□ 1.57
NCAPD3P42695 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NCAPD3P42695 AC011270.2-201ENST00000624293 2550 ntBASIC24.88■■□□□ 1.57
NCAPD3P42695 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
NCAPD3P42695 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
NCAPD3P42695 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
NCAPD3P42695 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC24.88■■□□□ 1.57
NCAPD3P42695 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
NCAPD3P42695 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms