Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.09□□□□□ -0.47
CEACAM3P40198 AL136309.1-201ENST00000403917 691 ntBASIC12.09□□□□□ -0.47
CEACAM3P40198 MIR1909-201ENST00000411312 80 ntBASIC12.09□□□□□ -0.47
CEACAM3P40198 FAM21FP-201ENST00000426241 1131 ntBASIC12.09□□□□□ -0.47
CEACAM3P40198 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.09□□□□□ -0.47
CEACAM3P40198 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.09□□□□□ -0.47
CEACAM3P40198 ATP5G2P4-201ENST00000442175 420 ntBASIC12.09□□□□□ -0.47
CEACAM3P40198 HOMER2P2-201ENST00000451621 847 ntBASIC12.09□□□□□ -0.47
CEACAM3P40198 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.09□□□□□ -0.47
CEACAM3P40198 HILS1-202ENST00000545329 423 ntBASIC12.09□□□□□ -0.47
CEACAM3P40198 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.09□□□□□ -0.47
CEACAM3P40198 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.09□□□□□ -0.47
CEACAM3P40198 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.09□□□□□ -0.47
CEACAM3P40198 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CEACAM3P40198 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 AC008687.7-202ENST00000637404 953 ntBASIC12.09□□□□□ -0.47
CEACAM3P40198 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
CEACAM3P40198 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
CEACAM3P40198 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.09□□□□□ -0.47
CEACAM3P40198 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.09□□□□□ -0.47
CEACAM3P40198 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.09□□□□□ -0.47
CEACAM3P40198 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 INTS4P1-203ENST00000641008 3683 ntBASIC12.09□□□□□ -0.47
CEACAM3P40198 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.09□□□□□ -0.47
CEACAM3P40198 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 MRPL37P1-201ENST00000592451 1337 ntBASIC12.09□□□□□ -0.47
CEACAM3P40198 FP325330.2-201ENST00000624219 5630 ntBASIC12.09□□□□□ -0.47
CEACAM3P40198 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
CEACAM3P40198 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CEACAM3P40198 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.47
CEACAM3P40198 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CEACAM3P40198 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CEACAM3P40198 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
CEACAM3P40198 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CEACAM3P40198 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.08□□□□□ -0.48
CEACAM3P40198 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CEACAM3P40198 AC011840.2-201ENST00000563063 1520 ntBASIC12.08□□□□□ -0.48
CEACAM3P40198 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CEACAM3P40198 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CEACAM3P40198 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.08□□□□□ -0.48
CEACAM3P40198 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.08□□□□□ -0.48
CEACAM3P40198 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.08□□□□□ -0.48
CEACAM3P40198 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 AC079776.1-201ENST00000401540 1152 ntBASIC12.08□□□□□ -0.48
CEACAM3P40198 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CEACAM3P40198 RN7SKP175-201ENST00000408472 289 ntBASIC12.08□□□□□ -0.48
CEACAM3P40198 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.08□□□□□ -0.48
CEACAM3P40198 AL391280.1-201ENST00000506969 1062 ntBASIC12.08□□□□□ -0.48
CEACAM3P40198 ALG3P1-201ENST00000508806 1114 ntBASIC12.08□□□□□ -0.48
CEACAM3P40198 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.08□□□□□ -0.48
CEACAM3P40198 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC12.08□□□□□ -0.48
CEACAM3P40198 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.08□□□□□ -0.48
CEACAM3P40198 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.08□□□□□ -0.48
CEACAM3P40198 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CEACAM3P40198 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 AC005089.1-201ENST00000619486 2241 ntBASIC12.08□□□□□ -0.48
CEACAM3P40198 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
CEACAM3P40198 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.08□□□□□ -0.48
CEACAM3P40198 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.08□□□□□ -0.48
CEACAM3P40198 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.08□□□□□ -0.48
CEACAM3P40198 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CEACAM3P40198 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CEACAM3P40198 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
CEACAM3P40198 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CEACAM3P40198 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CEACAM3P40198 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CEACAM3P40198 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CEACAM3P40198 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CEACAM3P40198 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms