Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.62□□□□□ -0.07
HMGCLP35914 AL591846.1-201ENST00000451736 433 ntBASIC14.62□□□□□ -0.07
HMGCLP35914 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGCLP35914 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.62□□□□□ -0.07
HMGCLP35914 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCLP35914 TUBB8P8-201ENST00000458717 1058 ntBASIC14.62□□□□□ -0.07
HMGCLP35914 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.62□□□□□ -0.07
HMGCLP35914 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.62□□□□□ -0.07
HMGCLP35914 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.62□□□□□ -0.07
HMGCLP35914 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGCLP35914 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
HMGCLP35914 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.62□□□□□ -0.07
HMGCLP35914 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGCLP35914 AL023803.2-201ENST00000620080 638 ntBASIC14.62□□□□□ -0.07
HMGCLP35914 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.62□□□□□ -0.07
HMGCLP35914 Z98259.2-201ENST00000641583 609 ntBASIC14.62□□□□□ -0.07
HMGCLP35914 AC026748.1-201ENST00000624349 3251 ntBASIC14.62□□□□□ -0.07
HMGCLP35914 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCLP35914 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.62□□□□□ -0.07
HMGCLP35914 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HMGCLP35914 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCLP35914 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HMGCLP35914 AL008718.2-201ENST00000609206 1313 ntBASIC14.62□□□□□ -0.07
HMGCLP35914 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.62□□□□□ -0.07
HMGCLP35914 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGCLP35914 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.61□□□□□ -0.07
HMGCLP35914 AC011498.7-201ENST00000624986 2027 ntBASIC14.61□□□□□ -0.07
HMGCLP35914 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGCLP35914 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGCLP35914 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGCLP35914 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 POM121L10P-201ENST00000436994 1285 ntBASIC14.61□□□□□ -0.07
HMGCLP35914 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
HMGCLP35914 KLF2P1-201ENST00000447438 1042 ntBASIC14.61□□□□□ -0.07
HMGCLP35914 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.61□□□□□ -0.07
HMGCLP35914 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGCLP35914 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.61□□□□□ -0.07
HMGCLP35914 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.61□□□□□ -0.07
HMGCLP35914 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.61□□□□□ -0.07
HMGCLP35914 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HMGCLP35914 AC005586.2-201ENST00000563946 837 ntBASIC14.61□□□□□ -0.07
HMGCLP35914 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.61□□□□□ -0.07
HMGCLP35914 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 AC005324.6-201ENST00000587972 613 ntBASIC14.61□□□□□ -0.07
HMGCLP35914 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGCLP35914 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.61□□□□□ -0.07
HMGCLP35914 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
HMGCLP35914 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
HMGCLP35914 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGCLP35914 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.61□□□□□ -0.07
HMGCLP35914 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HMGCLP35914 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
HMGCLP35914 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HMGCLP35914 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGCLP35914 KRT8P29-201ENST00000420409 1371 ntBASIC14.6□□□□□ -0.07
HMGCLP35914 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.6□□□□□ -0.07
HMGCLP35914 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGCLP35914 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGCLP35914 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HMGCLP35914 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGCLP35914 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGCLP35914 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HMGCLP35914 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGCLP35914 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HMGCLP35914 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.6□□□□□ -0.07
HMGCLP35914 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGCLP35914 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
HMGCLP35914 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
HMGCLP35914 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
HMGCLP35914 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGCLP35914 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HMGCLP35914 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.6□□□□□ -0.07
HMGCLP35914 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HMGCLP35914 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HMGCLP35914 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms