Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHRNA3P32297 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CHRNA3P32297 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CHRNA3P32297 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHRNA3P32297 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
CHRNA3P32297 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CHRNA3P32297 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
CHRNA3P32297 KRT8P24-201ENST00000560290 1559 ntBASIC15.58■□□□□ 0.09
CHRNA3P32297 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CHRNA3P32297 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHRNA3P32297 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHRNA3P32297 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHRNA3P32297 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHRNA3P32297 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CHRNA3P32297 AC092933.1-201ENST00000393644 945 ntBASIC15.58■□□□□ 0.08
CHRNA3P32297 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CHRNA3P32297 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.58■□□□□ 0.08
CHRNA3P32297 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.58■□□□□ 0.08
CHRNA3P32297 SNX29P1-201ENST00000548357 1007 ntBASIC15.58■□□□□ 0.08
CHRNA3P32297 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.58■□□□□ 0.08
CHRNA3P32297 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CHRNA3P32297 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.58■□□□□ 0.08
CHRNA3P32297 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRNA3P32297 AP005019.2-201ENST00000615104 511 ntBASIC15.58■□□□□ 0.08
CHRNA3P32297 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CHRNA3P32297 MIR6775-201ENST00000617557 69 ntBASIC15.58■□□□□ 0.08
CHRNA3P32297 MIR6752-201ENST00000618442 71 ntBASIC15.58■□□□□ 0.08
CHRNA3P32297 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRNA3P32297 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.58■□□□□ 0.08
CHRNA3P32297 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.58■□□□□ 0.08
CHRNA3P32297 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.58■□□□□ 0.08
CHRNA3P32297 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CHRNA3P32297 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRNA3P32297 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRNA3P32297 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHRNA3P32297 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CHRNA3P32297 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRNA3P32297 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRNA3P32297 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CHRNA3P32297 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHRNA3P32297 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRNA3P32297 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRNA3P32297 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CHRNA3P32297 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHRNA3P32297 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHRNA3P32297 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.58■□□□□ 0.08
CHRNA3P32297 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CHRNA3P32297 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CHRNA3P32297 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CHRNA3P32297 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CHRNA3P32297 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.58■□□□□ 0.08
CHRNA3P32297 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRNA3P32297 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CHRNA3P32297 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.58■□□□□ 0.08
CHRNA3P32297 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.58■□□□□ 0.08
CHRNA3P32297 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
CHRNA3P32297 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.57■□□□□ 0.08
CHRNA3P32297 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.57■□□□□ 0.08
CHRNA3P32297 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
CHRNA3P32297 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CHRNA3P32297 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CHRNA3P32297 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.57■□□□□ 0.08
CHRNA3P32297 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CHRNA3P32297 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.57■□□□□ 0.08
CHRNA3P32297 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.57■□□□□ 0.08
CHRNA3P32297 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CHRNA3P32297 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
CHRNA3P32297 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.57■□□□□ 0.08
CHRNA3P32297 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.57■□□□□ 0.08
CHRNA3P32297 NUS1P3-201ENST00000423502 862 ntBASIC15.57■□□□□ 0.08
CHRNA3P32297 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.57■□□□□ 0.08
CHRNA3P32297 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CHRNA3P32297 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.57■□□□□ 0.08
CHRNA3P32297 AC104989.1-201ENST00000519711 778 ntBASIC15.57■□□□□ 0.08
CHRNA3P32297 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 AP005482.1-201ENST00000563722 1273 ntBASIC15.57■□□□□ 0.08
CHRNA3P32297 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CHRNA3P32297 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 AC089987.1-201ENST00000551654 2209 ntBASIC15.57■□□□□ 0.08
CHRNA3P32297 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.57■□□□□ 0.08
CHRNA3P32297 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 PDIA3P1-201ENST00000471856 1510 ntBASIC15.57■□□□□ 0.08
CHRNA3P32297 TCAM1P-207ENST00000485295 1537 ntBASIC15.57■□□□□ 0.08
CHRNA3P32297 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA3P32297 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CHRNA3P32297 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms