Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 DNAJB3-201ENST00000446806 729 ntBASIC13.11□□□□□ -0.31
CD40LGP29965 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.11□□□□□ -0.31
CD40LGP29965 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CD40LGP29965 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.11□□□□□ -0.31
CD40LGP29965 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 MIR3687-2-201ENST00000577708 61 ntBASIC13.11□□□□□ -0.31
CD40LGP29965 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.11□□□□□ -0.31
CD40LGP29965 MIR6074-201ENST00000612054 107 ntBASIC13.11□□□□□ -0.31
CD40LGP29965 MIR3687-1-201ENST00000614492 61 ntBASIC13.11□□□□□ -0.31
CD40LGP29965 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.11□□□□□ -0.31
CD40LGP29965 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CD40LGP29965 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.11□□□□□ -0.31
CD40LGP29965 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.11□□□□□ -0.31
CD40LGP29965 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.11□□□□□ -0.31
CD40LGP29965 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CD40LGP29965 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CD40LGP29965 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 MIR193BHG-211ENST00000641433 5365 ntBASIC13.11□□□□□ -0.31
CD40LGP29965 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
CD40LGP29965 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
CD40LGP29965 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.11□□□□□ -0.31
CD40LGP29965 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.11□□□□□ -0.31
CD40LGP29965 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CD40LGP29965 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.11□□□□□ -0.31
CD40LGP29965 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
CD40LGP29965 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CD40LGP29965 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.1□□□□□ -0.31
CD40LGP29965 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 AGAP12P-201ENST00000585227 2359 ntBASIC13.1□□□□□ -0.31
CD40LGP29965 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
CD40LGP29965 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.1□□□□□ -0.31
CD40LGP29965 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.1□□□□□ -0.31
CD40LGP29965 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CD40LGP29965 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.1□□□□□ -0.31
CD40LGP29965 MIR574-201ENST00000385209 96 ntBASIC13.1□□□□□ -0.31
CD40LGP29965 AL391647.1-201ENST00000395664 511 ntBASIC13.1□□□□□ -0.31
CD40LGP29965 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.1□□□□□ -0.31
CD40LGP29965 IGLL3P-201ENST00000412472 434 ntBASIC13.1□□□□□ -0.31
CD40LGP29965 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.1□□□□□ -0.31
CD40LGP29965 AL139010.1-201ENST00000454878 894 ntBASIC13.1□□□□□ -0.31
CD40LGP29965 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.1□□□□□ -0.31
CD40LGP29965 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.1□□□□□ -0.31
CD40LGP29965 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.1□□□□□ -0.31
CD40LGP29965 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.1□□□□□ -0.31
CD40LGP29965 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.1□□□□□ -0.31
CD40LGP29965 AC018845.2-201ENST00000568326 409 ntBASIC13.1□□□□□ -0.31
CD40LGP29965 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.1□□□□□ -0.31
CD40LGP29965 MTDHP5-201ENST00000598980 586 ntBASIC13.1□□□□□ -0.31
CD40LGP29965 AC068137.2-201ENST00000605408 478 ntBASIC13.1□□□□□ -0.31
CD40LGP29965 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.1□□□□□ -0.31
CD40LGP29965 AC010970.1-201ENST00000445125 1848 ntBASIC13.1□□□□□ -0.31
CD40LGP29965 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CD40LGP29965 AC009474.1-201ENST00000455096 1565 ntBASIC13.1□□□□□ -0.31
CD40LGP29965 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CD40LGP29965 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
CD40LGP29965 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CD40LGP29965 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CD40LGP29965 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CD40LGP29965 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CD40LGP29965 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
CD40LGP29965 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CD40LGP29965 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CD40LGP29965 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CD40LGP29965 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms