Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
VAMP1P23763 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
VAMP1P23763 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.55□□□□□ -0.4
VAMP1P23763 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.55□□□□□ -0.4
VAMP1P23763 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
VAMP1P23763 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.55□□□□□ -0.4
VAMP1P23763 AC020658.7-201ENST00000624274 2442 ntBASIC12.54□□□□□ -0.4
VAMP1P23763 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
VAMP1P23763 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 AL157414.3-201ENST00000624276 1954 ntBASIC12.54□□□□□ -0.4
VAMP1P23763 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 AC020910.6-201ENST00000623084 1459 ntBASIC12.54□□□□□ -0.4
VAMP1P23763 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
VAMP1P23763 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.54□□□□□ -0.4
VAMP1P23763 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
VAMP1P23763 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.54□□□□□ -0.4
VAMP1P23763 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.54□□□□□ -0.4
VAMP1P23763 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 SPCS2P4-201ENST00000436160 681 ntBASIC12.54□□□□□ -0.4
VAMP1P23763 SPDYE11-202ENST00000450699 704 ntBASIC12.54□□□□□ -0.4
VAMP1P23763 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.54□□□□□ -0.4
VAMP1P23763 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.54□□□□□ -0.4
VAMP1P23763 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.54□□□□□ -0.4
VAMP1P23763 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
VAMP1P23763 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.54□□□□□ -0.4
VAMP1P23763 SPDYE9P-201ENST00000570642 692 ntBASIC12.54□□□□□ -0.4
VAMP1P23763 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.54□□□□□ -0.4
VAMP1P23763 AC015849.4-201ENST00000603678 421 ntTSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 SPDYE10P-202ENST00000612005 668 ntBASIC12.54□□□□□ -0.4
VAMP1P23763 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 SPDYE8P-202ENST00000612377 668 ntBASIC12.54□□□□□ -0.4
VAMP1P23763 AL513190.1-201ENST00000621254 727 ntBASIC12.54□□□□□ -0.4
VAMP1P23763 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.54□□□□□ -0.4
VAMP1P23763 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 AL445209.1-201ENST00000607269 3491 ntBASIC12.54□□□□□ -0.4
VAMP1P23763 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.54□□□□□ -0.4
VAMP1P23763 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.54□□□□□ -0.4
VAMP1P23763 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VAMP1P23763 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.54□□□□□ -0.4
VAMP1P23763 MPP4-207ENST00000428900 2320 ntTSL 2 BASIC12.54□□□□□ -0.4
VAMP1P23763 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.54□□□□□ -0.4
VAMP1P23763 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.54□□□□□ -0.4
VAMP1P23763 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
VAMP1P23763 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.53□□□□□ -0.4
VAMP1P23763 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.53□□□□□ -0.4
VAMP1P23763 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.53□□□□□ -0.4
VAMP1P23763 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.53□□□□□ -0.4
VAMP1P23763 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VAMP1P23763 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
VAMP1P23763 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.53□□□□□ -0.4
VAMP1P23763 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms