Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.89□□□□□ -0.03
XPAP23025 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
XPAP23025 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
XPAP23025 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
XPAP23025 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
XPAP23025 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.89□□□□□ -0.03
XPAP23025 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.89□□□□□ -0.03
XPAP23025 AC006033.1-201ENST00000440505 426 ntBASIC14.89□□□□□ -0.03
XPAP23025 PUDPP3-201ENST00000445368 636 ntBASIC14.89□□□□□ -0.03
XPAP23025 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.89□□□□□ -0.03
XPAP23025 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.89□□□□□ -0.03
XPAP23025 AP001258.2-201ENST00000529891 490 ntBASIC14.89□□□□□ -0.03
XPAP23025 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.89□□□□□ -0.03
XPAP23025 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.89□□□□□ -0.03
XPAP23025 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.89□□□□□ -0.03
XPAP23025 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.89□□□□□ -0.03
XPAP23025 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.89□□□□□ -0.03
XPAP23025 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.89□□□□□ -0.03
XPAP23025 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
XPAP23025 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.89□□□□□ -0.03
XPAP23025 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.89□□□□□ -0.03
XPAP23025 AC007292.2-201ENST00000593524 1812 ntBASIC14.89□□□□□ -0.03
XPAP23025 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.89□□□□□ -0.03
XPAP23025 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
XPAP23025 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
XPAP23025 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
XPAP23025 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
XPAP23025 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
XPAP23025 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
XPAP23025 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
XPAP23025 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
XPAP23025 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.88□□□□□ -0.03
XPAP23025 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.88□□□□□ -0.03
XPAP23025 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.88□□□□□ -0.03
XPAP23025 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.88□□□□□ -0.03
XPAP23025 AL035414.1-201ENST00000451327 857 ntBASIC14.88□□□□□ -0.03
XPAP23025 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.88□□□□□ -0.03
XPAP23025 ALG3P1-201ENST00000508806 1114 ntBASIC14.88□□□□□ -0.03
XPAP23025 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.88□□□□□ -0.03
XPAP23025 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.88□□□□□ -0.03
XPAP23025 DUX4L46-201ENST00000566845 751 ntBASIC14.88□□□□□ -0.03
XPAP23025 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.88□□□□□ -0.03
XPAP23025 BX088702.1-201ENST00000610784 235 ntBASIC14.88□□□□□ -0.03
XPAP23025 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.88□□□□□ -0.03
XPAP23025 AL023803.2-201ENST00000620080 638 ntBASIC14.88□□□□□ -0.03
XPAP23025 AC027601.3-201ENST00000622907 509 ntBASIC14.88□□□□□ -0.03
XPAP23025 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
XPAP23025 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
XPAP23025 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.88□□□□□ -0.03
XPAP23025 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.88□□□□□ -0.03
XPAP23025 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
XPAP23025 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
XPAP23025 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
XPAP23025 AC018442.1-201ENST00000421439 2061 ntBASIC14.88□□□□□ -0.03
XPAP23025 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.87□□□□□ -0.03
XPAP23025 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.87□□□□□ -0.03
XPAP23025 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.87□□□□□ -0.03
XPAP23025 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms