Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.15■□□□□ 0.02
ERCC2P18074 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.15■□□□□ 0.02
ERCC2P18074 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.15■□□□□ 0.02
ERCC2P18074 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.15■□□□□ 0.02
ERCC2P18074 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.15■□□□□ 0.02
ERCC2P18074 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
ERCC2P18074 MIR4741-201ENST00000579822 90 ntBASIC15.15■□□□□ 0.02
ERCC2P18074 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 E2F3P2-201ENST00000447755 1422 ntBASIC15.15■□□□□ 0.02
ERCC2P18074 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ERCC2P18074 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
ERCC2P18074 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ERCC2P18074 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.15■□□□□ 0.02
ERCC2P18074 AC012617.1-204ENST00000586340 2305 ntBASIC15.15■□□□□ 0.02
ERCC2P18074 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ERCC2P18074 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.14■□□□□ 0.01
ERCC2P18074 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.14■□□□□ 0.01
ERCC2P18074 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ERCC2P18074 AC152010.1-201ENST00000415779 2006 ntBASIC15.14■□□□□ 0.01
ERCC2P18074 AC011498.7-201ENST00000624986 2027 ntBASIC15.14■□□□□ 0.01
ERCC2P18074 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
ERCC2P18074 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.14■□□□□ 0.01
ERCC2P18074 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ERCC2P18074 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.14■□□□□ 0.01
ERCC2P18074 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ERCC2P18074 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.14■□□□□ 0.01
ERCC2P18074 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.14■□□□□ 0.01
ERCC2P18074 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.14■□□□□ 0.01
ERCC2P18074 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.14■□□□□ 0.01
ERCC2P18074 BNIP3P42-201ENST00000454982 569 ntBASIC15.14■□□□□ 0.01
ERCC2P18074 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.14■□□□□ 0.01
ERCC2P18074 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.14■□□□□ 0.01
ERCC2P18074 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.14■□□□□ 0.01
ERCC2P18074 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.14■□□□□ 0.01
ERCC2P18074 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.14■□□□□ 0.01
ERCC2P18074 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.14■□□□□ 0.01
ERCC2P18074 BNIP3P29-201ENST00000598302 571 ntBASIC15.14■□□□□ 0.01
ERCC2P18074 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.14■□□□□ 0.01
ERCC2P18074 AC011447.5-201ENST00000616168 564 ntBASIC15.14■□□□□ 0.01
ERCC2P18074 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.14■□□□□ 0.01
ERCC2P18074 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.14■□□□□ 0.01
ERCC2P18074 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ERCC2P18074 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.14■□□□□ 0.01
ERCC2P18074 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
ERCC2P18074 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ERCC2P18074 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
ERCC2P18074 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ERCC2P18074 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.13■□□□□ 0.01
ERCC2P18074 HSPA7-201ENST00000445535 1927 ntBASIC15.13■□□□□ 0.01
ERCC2P18074 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.13■□□□□ 0.01
ERCC2P18074 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.13■□□□□ 0.01
ERCC2P18074 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.13■□□□□ 0.01
ERCC2P18074 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ERCC2P18074 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms