Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA4P13612 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.17■□□□□ 0.18
ITGA4P13612 AC010141.1-201ENST00000411585 623 ntBASIC16.17■□□□□ 0.18
ITGA4P13612 AC016700.1-201ENST00000429424 312 ntBASIC16.17■□□□□ 0.18
ITGA4P13612 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA4P13612 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA4P13612 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.17■□□□□ 0.18
ITGA4P13612 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.17■□□□□ 0.18
ITGA4P13612 MIR4783-201ENST00000580343 82 ntBASIC16.17■□□□□ 0.18
ITGA4P13612 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.17■□□□□ 0.18
ITGA4P13612 NDUFV2P1-201ENST00000596415 907 ntBASIC16.17■□□□□ 0.18
ITGA4P13612 AC009955.4-201ENST00000597192 544 ntBASIC16.17■□□□□ 0.18
ITGA4P13612 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA4P13612 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA4P13612 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.17■□□□□ 0.18
ITGA4P13612 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.17■□□□□ 0.18
ITGA4P13612 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA4P13612 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.17■□□□□ 0.18
ITGA4P13612 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ITGA4P13612 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
ITGA4P13612 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA4P13612 E2F3P2-201ENST00000447755 1422 ntBASIC16.17■□□□□ 0.18
ITGA4P13612 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA4P13612 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA4P13612 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ITGA4P13612 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.17■□□□□ 0.18
ITGA4P13612 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.17■□□□□ 0.18
ITGA4P13612 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.17■□□□□ 0.18
ITGA4P13612 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA4P13612 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.16■□□□□ 0.18
ITGA4P13612 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.16■□□□□ 0.18
ITGA4P13612 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA4P13612 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA4P13612 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA4P13612 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA4P13612 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA4P13612 AP001267.2-201ENST00000532619 2086 ntBASIC16.16■□□□□ 0.18
ITGA4P13612 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.16■□□□□ 0.18
ITGA4P13612 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA4P13612 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.16■□□□□ 0.18
ITGA4P13612 AC106794.1-201ENST00000506935 792 ntBASIC16.16■□□□□ 0.18
ITGA4P13612 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.16■□□□□ 0.18
ITGA4P13612 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.16■□□□□ 0.18
ITGA4P13612 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.16■□□□□ 0.18
ITGA4P13612 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.16■□□□□ 0.18
ITGA4P13612 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA4P13612 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.16■□□□□ 0.18
ITGA4P13612 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.16■□□□□ 0.18
ITGA4P13612 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.16■□□□□ 0.18
ITGA4P13612 BNIP3P13-201ENST00000599968 566 ntBASIC16.16■□□□□ 0.18
ITGA4P13612 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.16■□□□□ 0.18
ITGA4P13612 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA4P13612 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.16■□□□□ 0.18
ITGA4P13612 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA4P13612 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA4P13612 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.16■□□□□ 0.18
ITGA4P13612 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.16■□□□□ 0.18
ITGA4P13612 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA4P13612 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.16■□□□□ 0.18
ITGA4P13612 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.16■□□□□ 0.18
ITGA4P13612 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA4P13612 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA4P13612 AC027601.5-201ENST00000624065 2482 ntBASIC16.16■□□□□ 0.18
ITGA4P13612 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ITGA4P13612 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ITGA4P13612 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
ITGA4P13612 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ITGA4P13612 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.15■□□□□ 0.18
ITGA4P13612 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ITGA4P13612 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ITGA4P13612 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
ITGA4P13612 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ITGA4P13612 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.15■□□□□ 0.18
ITGA4P13612 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ITGA4P13612 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ITGA4P13612 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ITGA4P13612 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ITGA4P13612 DPM3-202ENST00000368399 517 ntBASIC16.15■□□□□ 0.18
ITGA4P13612 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ITGA4P13612 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ITGA4P13612 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ITGA4P13612 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ITGA4P13612 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.15■□□□□ 0.18
ITGA4P13612 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.15■□□□□ 0.18
ITGA4P13612 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ITGA4P13612 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ITGA4P13612 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.15■□□□□ 0.18
ITGA4P13612 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.15■□□□□ 0.18
ITGA4P13612 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ITGA4P13612 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.15■□□□□ 0.18
ITGA4P13612 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.15■□□□□ 0.18
ITGA4P13612 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.15■□□□□ 0.18
ITGA4P13612 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ITGA4P13612 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ITGA4P13612 RN7SL163P-201ENST00000583100 276 ntBASIC16.15■□□□□ 0.18
ITGA4P13612 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.15■□□□□ 0.18
ITGA4P13612 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ITGA4P13612 AC008825.2-201ENST00000603374 718 ntBASIC16.15■□□□□ 0.18
ITGA4P13612 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.15■□□□□ 0.18
ITGA4P13612 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms