Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.29■□□□□ 0.2
COL11A1P12107 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COL11A1P12107 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
COL11A1P12107 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
COL11A1P12107 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
COL11A1P12107 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.29■□□□□ 0.2
COL11A1P12107 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
COL11A1P12107 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
COL11A1P12107 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL11A1P12107 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.29■□□□□ 0.2
COL11A1P12107 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COL11A1P12107 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.29■□□□□ 0.2
COL11A1P12107 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COL11A1P12107 SLC25A15P3-201ENST00000505530 290 ntBASIC16.29■□□□□ 0.2
COL11A1P12107 ALG1L6P-201ENST00000515248 758 ntBASIC16.29■□□□□ 0.2
COL11A1P12107 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.29■□□□□ 0.2
COL11A1P12107 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.29■□□□□ 0.2
COL11A1P12107 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.29■□□□□ 0.2
COL11A1P12107 AC141586.1-203ENST00000567242 366 ntBASIC16.29■□□□□ 0.2
COL11A1P12107 RN7SL357P-201ENST00000581065 298 ntBASIC16.29■□□□□ 0.2
COL11A1P12107 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.28■□□□□ 0.2
COL11A1P12107 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL11A1P12107 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL11A1P12107 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.28■□□□□ 0.2
COL11A1P12107 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
COL11A1P12107 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL11A1P12107 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.28■□□□□ 0.2
COL11A1P12107 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL11A1P12107 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.28■□□□□ 0.2
COL11A1P12107 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL11A1P12107 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
COL11A1P12107 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.28■□□□□ 0.2
COL11A1P12107 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL11A1P12107 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.28■□□□□ 0.2
COL11A1P12107 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL11A1P12107 GRPEL2P1-201ENST00000453145 339 ntBASIC16.28■□□□□ 0.2
COL11A1P12107 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.28■□□□□ 0.2
COL11A1P12107 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.28■□□□□ 0.2
COL11A1P12107 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
COL11A1P12107 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.28■□□□□ 0.2
COL11A1P12107 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.28■□□□□ 0.2
COL11A1P12107 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.28■□□□□ 0.2
COL11A1P12107 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.28■□□□□ 0.2
COL11A1P12107 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
COL11A1P12107 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
COL11A1P12107 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.28■□□□□ 0.2
COL11A1P12107 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL11A1P12107 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.28■□□□□ 0.2
COL11A1P12107 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL11A1P12107 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL11A1P12107 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.28■□□□□ 0.2
COL11A1P12107 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL11A1P12107 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
COL11A1P12107 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
COL11A1P12107 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL11A1P12107 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL11A1P12107 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
COL11A1P12107 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL11A1P12107 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL11A1P12107 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
COL11A1P12107 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.27■□□□□ 0.2
COL11A1P12107 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL11A1P12107 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL11A1P12107 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL11A1P12107 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL11A1P12107 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL11A1P12107 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL11A1P12107 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL11A1P12107 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL11A1P12107 PSMD4P1-201ENST00000433951 1109 ntBASIC16.27■□□□□ 0.2
COL11A1P12107 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.27■□□□□ 0.2
COL11A1P12107 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.27■□□□□ 0.2
COL11A1P12107 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.27■□□□□ 0.2
COL11A1P12107 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.27■□□□□ 0.2
COL11A1P12107 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL11A1P12107 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.27■□□□□ 0.2
COL11A1P12107 AC097359.2-201ENST00000604992 2389 ntBASIC16.27■□□□□ 0.2
COL11A1P12107 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL11A1P12107 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL11A1P12107 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL11A1P12107 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.27■□□□□ 0.2
COL11A1P12107 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL11A1P12107 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL11A1P12107 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms