Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TOP1P11387 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
TOP1P11387 AC092135.3-201ENST00000624151 1846 ntBASIC17.31■□□□□ 0.36
TOP1P11387 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 GRK6P1-201ENST00000400595 1711 ntBASIC17.31■□□□□ 0.36
TOP1P11387 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.31■□□□□ 0.36
TOP1P11387 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TOP1P11387 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TOP1P11387 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.31■□□□□ 0.36
TOP1P11387 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.31■□□□□ 0.36
TOP1P11387 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.31■□□□□ 0.36
TOP1P11387 CICP12-201ENST00000455801 843 ntBASIC17.31■□□□□ 0.36
TOP1P11387 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.31■□□□□ 0.36
TOP1P11387 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TOP1P11387 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.31■□□□□ 0.36
TOP1P11387 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.31■□□□□ 0.36
TOP1P11387 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.31■□□□□ 0.36
TOP1P11387 MIR3615-201ENST00000581999 87 ntBASIC17.31■□□□□ 0.36
TOP1P11387 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.31■□□□□ 0.36
TOP1P11387 AC022748.3-201ENST00000621828 275 ntBASIC17.31■□□□□ 0.36
TOP1P11387 AC027601.3-201ENST00000622907 509 ntBASIC17.31■□□□□ 0.36
TOP1P11387 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TOP1P11387 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
TOP1P11387 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TOP1P11387 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TOP1P11387 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.31■□□□□ 0.36
TOP1P11387 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.31■□□□□ 0.36
TOP1P11387 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.3■□□□□ 0.36
TOP1P11387 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TOP1P11387 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.3■□□□□ 0.36
TOP1P11387 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TOP1P11387 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
TOP1P11387 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.3■□□□□ 0.36
TOP1P11387 FAM58BP-201ENST00000439056 645 ntBASIC17.3■□□□□ 0.36
TOP1P11387 TUBB8P8-201ENST00000458717 1058 ntBASIC17.3■□□□□ 0.36
TOP1P11387 AC022494.1-201ENST00000466044 728 ntBASIC17.3■□□□□ 0.36
TOP1P11387 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.3■□□□□ 0.36
TOP1P11387 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.3■□□□□ 0.36
TOP1P11387 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.3■□□□□ 0.36
TOP1P11387 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.3■□□□□ 0.36
TOP1P11387 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TOP1P11387 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.3■□□□□ 0.36
TOP1P11387 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TOP1P11387 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
TOP1P11387 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.3■□□□□ 0.36
TOP1P11387 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TOP1P11387 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TOP1P11387 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.3■□□□□ 0.36
TOP1P11387 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP1P11387 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOP1P11387 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TOP1P11387 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP1P11387 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TOP1P11387 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOP1P11387 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TOP1P11387 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOP1P11387 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.29■□□□□ 0.36
TOP1P11387 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TOP1P11387 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOP1P11387 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.29■□□□□ 0.36
TOP1P11387 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP1P11387 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP1P11387 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TOP1P11387 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms