Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.44■□□□□ 0.22
HOXC6P09630 MIR2392-201ENST00000584881 84 ntBASIC16.44■□□□□ 0.22
HOXC6P09630 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.44■□□□□ 0.22
HOXC6P09630 FO393412.1-201ENST00000619841 382 ntBASIC16.44■□□□□ 0.22
HOXC6P09630 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.44■□□□□ 0.22
HOXC6P09630 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC6P09630 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC6P09630 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC6P09630 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC6P09630 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.44■□□□□ 0.22
HOXC6P09630 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC6P09630 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HOXC6P09630 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HOXC6P09630 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.44■□□□□ 0.22
HOXC6P09630 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HOXC6P09630 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.43■□□□□ 0.22
HOXC6P09630 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.43■□□□□ 0.22
HOXC6P09630 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.43■□□□□ 0.22
HOXC6P09630 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HOXC6P09630 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.43■□□□□ 0.22
HOXC6P09630 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
HOXC6P09630 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HOXC6P09630 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
HOXC6P09630 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
HOXC6P09630 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.43■□□□□ 0.22
HOXC6P09630 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC16.43■□□□□ 0.22
HOXC6P09630 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 AC018638.5-201ENST00000450885 754 ntBASIC16.43■□□□□ 0.22
HOXC6P09630 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HOXC6P09630 RN7SL277P-201ENST00000481521 288 ntBASIC16.43■□□□□ 0.22
HOXC6P09630 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.43■□□□□ 0.22
HOXC6P09630 MIR5196-201ENST00000578146 115 ntBASIC16.43■□□□□ 0.22
HOXC6P09630 AP000322.3-201ENST00000608665 388 ntBASIC16.43■□□□□ 0.22
HOXC6P09630 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HOXC6P09630 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HOXC6P09630 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HOXC6P09630 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HOXC6P09630 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HOXC6P09630 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.42■□□□□ 0.22
HOXC6P09630 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.42■□□□□ 0.22
HOXC6P09630 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.42■□□□□ 0.22
HOXC6P09630 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HOXC6P09630 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HOXC6P09630 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.42■□□□□ 0.22
HOXC6P09630 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HOXC6P09630 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HOXC6P09630 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HOXC6P09630 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HOXC6P09630 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HOXC6P09630 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.42■□□□□ 0.22
HOXC6P09630 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HOXC6P09630 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.42■□□□□ 0.22
HOXC6P09630 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.42■□□□□ 0.22
HOXC6P09630 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HOXC6P09630 AC144831.1-201ENST00000573312 2656 ntBASIC16.42■□□□□ 0.22
HOXC6P09630 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HOXC6P09630 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HOXC6P09630 MIR645-201ENST00000385283 94 ntBASIC16.42■□□□□ 0.22
HOXC6P09630 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HOXC6P09630 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.42■□□□□ 0.22
HOXC6P09630 AC073869.2-201ENST00000417338 1026 ntBASIC16.42■□□□□ 0.22
HOXC6P09630 AC092580.1-201ENST00000433998 658 ntBASIC16.42■□□□□ 0.22
HOXC6P09630 LINC00634-202ENST00000505157 222 ntBASIC16.42■□□□□ 0.22
HOXC6P09630 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.42■□□□□ 0.22
HOXC6P09630 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.42■□□□□ 0.22
HOXC6P09630 AL022344.2-201ENST00000568976 968 ntBASIC16.42■□□□□ 0.22
HOXC6P09630 AC007952.4-201ENST00000573866 637 ntBASIC16.42■□□□□ 0.22
HOXC6P09630 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.42■□□□□ 0.22
HOXC6P09630 AC007250.1-201ENST00000608934 338 ntBASIC16.42■□□□□ 0.22
HOXC6P09630 AL591471.1-201ENST00000621855 229 ntBASIC16.42■□□□□ 0.22
HOXC6P09630 LINC00431-202ENST00000636375 159 ntBASIC16.42■□□□□ 0.22
HOXC6P09630 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.42■□□□□ 0.22
HOXC6P09630 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
HOXC6P09630 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
HOXC6P09630 AGAP7P-201ENST00000582299 2062 ntBASIC16.42■□□□□ 0.22
HOXC6P09630 AGAP14-201ENST00000624701 2060 ntBASIC16.42■□□□□ 0.22
HOXC6P09630 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HOXC6P09630 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.42■□□□□ 0.22
HOXC6P09630 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.42■□□□□ 0.22
HOXC6P09630 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HOXC6P09630 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
HOXC6P09630 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HOXC6P09630 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms