Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
UPK1BO75841 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
UPK1BO75841 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
UPK1BO75841 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK1BO75841 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
UPK1BO75841 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK1BO75841 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK1BO75841 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.82□□□□□ -0.36
UPK1BO75841 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.82□□□□□ -0.36
UPK1BO75841 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.82□□□□□ -0.36
UPK1BO75841 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK1BO75841 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.82□□□□□ -0.36
UPK1BO75841 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.82□□□□□ -0.36
UPK1BO75841 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.82□□□□□ -0.36
UPK1BO75841 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.82□□□□□ -0.36
UPK1BO75841 AL732292.2-201ENST00000609649 430 ntBASIC12.82□□□□□ -0.36
UPK1BO75841 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.82□□□□□ -0.36
UPK1BO75841 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.82□□□□□ -0.36
UPK1BO75841 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.82□□□□□ -0.36
UPK1BO75841 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
UPK1BO75841 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK1BO75841 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
UPK1BO75841 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
UPK1BO75841 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.82□□□□□ -0.36
UPK1BO75841 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC12.82□□□□□ -0.36
UPK1BO75841 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
UPK1BO75841 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.81□□□□□ -0.36
UPK1BO75841 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
UPK1BO75841 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK1BO75841 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.81□□□□□ -0.36
UPK1BO75841 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
UPK1BO75841 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.81□□□□□ -0.36
UPK1BO75841 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.81□□□□□ -0.36
UPK1BO75841 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.81□□□□□ -0.36
UPK1BO75841 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK1BO75841 KRT18P57-201ENST00000443599 1254 ntBASIC12.81□□□□□ -0.36
UPK1BO75841 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.81□□□□□ -0.36
UPK1BO75841 SLED1-202ENST00000512051 380 ntBASIC12.81□□□□□ -0.36
UPK1BO75841 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
UPK1BO75841 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.81□□□□□ -0.36
UPK1BO75841 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.81□□□□□ -0.36
UPK1BO75841 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.81□□□□□ -0.36
UPK1BO75841 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.81□□□□□ -0.36
UPK1BO75841 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.81□□□□□ -0.36
UPK1BO75841 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.81□□□□□ -0.36
UPK1BO75841 AC104758.3-203ENST00000562938 2123 ntBASIC12.81□□□□□ -0.36
UPK1BO75841 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.81□□□□□ -0.36
UPK1BO75841 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.81□□□□□ -0.36
UPK1BO75841 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.81□□□□□ -0.36
UPK1BO75841 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
UPK1BO75841 AC008608.2-201ENST00000606089 416 ntBASIC12.81□□□□□ -0.36
UPK1BO75841 AL031008.1-201ENST00000619963 541 ntBASIC12.81□□□□□ -0.36
UPK1BO75841 AL161645.1-201ENST00000622716 1255 ntBASIC12.81□□□□□ -0.36
UPK1BO75841 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
UPK1BO75841 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.81□□□□□ -0.36
UPK1BO75841 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
UPK1BO75841 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
UPK1BO75841 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms