Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.25□□□□□ -0.13
CPNE3O75131 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.25□□□□□ -0.13
CPNE3O75131 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.25□□□□□ -0.13
CPNE3O75131 AL606495.2-201ENST00000605867 535 ntBASIC14.25□□□□□ -0.13
CPNE3O75131 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.25□□□□□ -0.13
CPNE3O75131 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CPNE3O75131 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE3O75131 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.25□□□□□ -0.13
CPNE3O75131 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.25□□□□□ -0.13
CPNE3O75131 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.25□□□□□ -0.13
CPNE3O75131 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE3O75131 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CPNE3O75131 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE3O75131 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE3O75131 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CPNE3O75131 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE3O75131 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CPNE3O75131 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CPNE3O75131 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE3O75131 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CPNE3O75131 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CPNE3O75131 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CPNE3O75131 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.24□□□□□ -0.13
CPNE3O75131 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.24□□□□□ -0.13
CPNE3O75131 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.24□□□□□ -0.13
CPNE3O75131 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.24□□□□□ -0.13
CPNE3O75131 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CPNE3O75131 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CPNE3O75131 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 AC004945.1-201ENST00000416738 983 ntBASIC14.24□□□□□ -0.13
CPNE3O75131 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.24□□□□□ -0.13
CPNE3O75131 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.24□□□□□ -0.13
CPNE3O75131 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.24□□□□□ -0.13
CPNE3O75131 AKR7A2P1-201ENST00000460134 915 ntBASIC14.24□□□□□ -0.13
CPNE3O75131 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.24□□□□□ -0.13
CPNE3O75131 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.24□□□□□ -0.13
CPNE3O75131 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.24□□□□□ -0.13
CPNE3O75131 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.24□□□□□ -0.13
CPNE3O75131 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.24□□□□□ -0.13
CPNE3O75131 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CPNE3O75131 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.24□□□□□ -0.13
CPNE3O75131 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CPNE3O75131 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CPNE3O75131 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.24□□□□□ -0.13
CPNE3O75131 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.24□□□□□ -0.13
CPNE3O75131 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CPNE3O75131 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 AC018735.1-201ENST00000437208 1502 ntBASIC14.24□□□□□ -0.13
CPNE3O75131 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CPNE3O75131 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.24□□□□□ -0.13
CPNE3O75131 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE3O75131 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CPNE3O75131 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CPNE3O75131 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC14.24□□□□□ -0.13
CPNE3O75131 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.24□□□□□ -0.13
CPNE3O75131 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.24□□□□□ -0.13
CPNE3O75131 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CPNE3O75131 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 AC010327.5-201ENST00000586923 3061 ntBASIC14.23□□□□□ -0.13
CPNE3O75131 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CPNE3O75131 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CPNE3O75131 AL359183.1-201ENST00000623796 2132 ntBASIC14.23□□□□□ -0.13
CPNE3O75131 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CPNE3O75131 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE3O75131 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms